Intrinsic disorder in protein interactions: insights from a comprehensive structural analysis (Q33417626)

26 July 2017

Intrinsic disorder in protein interactions: insights from a comprehensive structural analysis (English)

1 reference

26 July 2017

3

Sergiy O Garbuzynskiy

1 reference

26 July 2017

6

Anna R Panchenko

1 reference

26 July 2017

Jessica H Fong

1

1 reference

26 July 2017

Benjamin A Shoemaker

series ordinal

2

1 reference

26 July 2017

Michail Y Lobanov

series ordinal

4

1 reference

26 July 2017

Oxana V Galzitskaya

series ordinal

5

1 reference

26 July 2017

language of work or name

1 reference

13 March 2009

1 reference

PLOS Computational Biology

26 July 2017

1 reference

26 July 2017

5

1 reference

26 July 2017

3

1 reference

26 July 2017

e1000316

1 reference

Creative Commons CC0 License

26 July 2017

start time

13 March 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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Protein disorder prediction at multiple levels of sensitivity and specificity

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Mechanism of coupled folding and binding of an intrinsically disordered protein

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Deciphering protein-protein interactions. Part I. Experimental techniques and databases

21 June 2018

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Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions.

21 June 2018

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Intrinsic disorder in the Protein Data Bank

21 June 2018

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Prediction of amyloidogenic and disordered regions in protein chains

21 June 2018

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Binding of intrinsically disordered proteins is not necessarily accompanied by a structural transition to a folded form

21 June 2018

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Protein disorder prediction by condensed PSSM considering propensity for order or disorder

21 June 2018

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Evolution of protein fold in the presence of functional constraints

21 June 2018

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Length-dependent prediction of protein intrinsic disorder.

21 June 2018

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Finding biologically relevant protein domain interactions: conserved binding mode analysis

21 June 2018

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Exploiting heterogeneous sequence properties improves prediction of protein disorder.

21 June 2018

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Structural disorder throws new light on moonlighting

21 June 2018

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IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content

21 June 2018

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RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins

21 June 2018

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Intrinsically unstructured proteins and their functions

21 June 2018

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Natively unfolded proteins

21 June 2018

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Structure of the ubiquitin hydrolase UCH-L3 complexed with a suicide substrate

21 June 2018

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CD-Search: protein domain annotations on the fly

21 June 2018

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Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

21 June 2018

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The importance of intrinsic disorder for protein phosphorylation

21 June 2018

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Protein topology determines binding mechanism

21 June 2018

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A new native EcHsp31 structure suggests a key role of structural flexibility for chaperone function

21 June 2018

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The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology

21 June 2018

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Protein disorder prediction: implications for structural proteomics

21 June 2018

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21 June 2018

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ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL

21 January 2018

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Intrinsically unstructured proteins evolve by repeat expansion

21 June 2018

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GlobPlot: Exploring protein sequences for globularity and disorder

21 June 2018

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Extended disordered proteins: targeting function with less scaffold

21 June 2018

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Intrinsically unstructured proteins

21 June 2018

1 reference

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Intrinsic disorder and protein function

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Coupling of folding and binding for unstructured proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

CDD: a database of conserved domain alignments with links to domain three-dimensional structure

21 June 2018

1 reference

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Comparing function and structure between entire proteomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Structured disorder and conformational selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Recognition between flexible protein molecules: induced and assisted folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

The Protein Data Bank and the challenge of structural genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Sequence complexity of disordered protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Why are "natively unfolded" proteins unstructured under physiologic conditions?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Structural symmetry and protein function

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Speeding molecular recognition by using the folding funnel: the fly-casting mechanism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Folding funnels and binding mechanisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

RNA binding strategies of ribosomal proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Crystal structure of a deubiquitinating enzyme (human UCH-L3) at 1.8 A resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Symmetry, stability, and dynamics of multidomain and multicomponent protein systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Coupling of local folding to site-specific binding of proteins to DNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646137

Flavors of protein disorder.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

A disorder to order transition accompanies catalysis in retinaldehyde dehydrogenase type II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

Analysis of ordered and disordered protein complexes reveals structural features discriminating between stable and unstable monomers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

Molecular Principles of the Interactions of Disordered Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

FoldUnfold: web server for the prediction of disordered regions in protein chain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

Predicting intrinsic disorder from amino acid sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

Coupled folding and binding with alpha-helix-forming molecular recognition elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

An increase in side chain entropy facilitates effector binding: NMR characterization of the side chain methyl group dynamics in Cdc42Hs

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

BIOCHEMISTRY: How Do Proteins Interact?

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000316

Prediction of unfolded segments in a protein sequence based on amino acid composition

21 January 2018

1 reference

12 December 2020

Trend of amino acid composition of proteins of different taxa

1 reference

12 December 2020

Statistically enhanced self-attraction of random patterns.

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12 December 2020

Increased protein backbone conformational entropy upon hydrophobic ligand binding

1 reference

12 December 2020

Intrinsic protein disorder in complete genomes

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12 December 2020

Functional significance of flexibility in proteins

1 reference

12 December 2020

15N NMR relaxation studies of free and inhibitor-bound 4-oxalocrotonate tautomerase: backbone dynamics and entropy changes of an enzyme upon inhibitor binding

1 reference

12 December 2020

Changes in the NMR-derived motional parameters of the insulin receptor substrate 1 phosphotyrosine binding domain upon binding to an interleukin 4 receptor phosphopeptide

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.1000316

Identifiers

DOI

1 reference

journals/ploscb/FongSGLGP09

26 July 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

26 July 2017

1 reference