Functionally related transcripts have common RNA motifs for specific RNA-binding proteins in trypanosomes (Q33390791)

26 July 2017

Functionally related transcripts have common RNA motifs for specific RNA-binding proteins in trypanosomes (English)

1 reference

26 July 2017

Griselda Noé

1

1 reference

26 July 2017

Javier G De Gaudenzi

series ordinal

2

1 reference

26 July 2017

Alberto C Frasch

series ordinal

3

1 reference

26 July 2017

8 December 2008

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26 July 2017

BMC Molecular Biology

1 reference

26 July 2017

9

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26 July 2017

107

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2199-9-107

26 July 2017

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Genome-wide identification of mRNAs associated with the translational regulator PUMILIO in Drosophila melanogaster

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Gene transcription in trypanosomes

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21 June 2018

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21 June 2018

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21 June 2018

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Characterization of deadenylation in trypanosome extracts and its inhibition by poly(A)-binding protein Pab1p

21 June 2018

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21 June 2018

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Molecular regulation of the life cycle of African trypanosomes.

21 June 2018

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Argonaute protein in the early divergent eukaryote Trypanosoma brucei: control of small interfering RNA accumulation and retroposon transcript abundance

21 June 2018

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Transcription in kinetoplastid protozoa: why be normal?

21 June 2018

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21 June 2018

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trans and cis splicing in trypanosomatids: mechanism, factors, and regulation

21 June 2018

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21 June 2018

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TcUBP-1, an mRNA destabilizing factor from trypanosomes, homodimerizes and interacts with novel AU-rich element- and Poly(A)-binding proteins forming a ribonucleoprotein complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

A common mechanism of stage-regulated gene expression in Leishmania mediated by a conserved 3'-untranslated region element.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Degradation of the unstable EP1 mRNA in Trypanosoma brucei involves initial destruction of the 3'-untranslated region

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

The exosome of Trypanosoma brucei

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Ribonucleoprotein infrastructure regulating the flow of genetic information between the genome and the proteome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Discovering common stem-loop motifs in unaligned RNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Trypanosome spliced leader RNA genes contain the first identified RNA polymerase II gene promoter in these organisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

AU-rich elements in the 3'-untranslated region of a new mucin-type gene family of Trypanosoma cruzi confers mRNA instability and modulates translation efficiency

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

A conserved stem-loop structure in the 3' untranslated region of procyclin mRNAs regulates expression in Trypanosoma brucei.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

RNA sequence analysis using covariance models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

RNA splicing is required to make the messenger RNA for a variant surface antigen in trypanosomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Crystal structure of the RNA-binding domain of the U1 small nuclear ribonucleoprotein A

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Identification of molecular contacts between the U1 A small nuclear ribonucleoprotein and U1 RNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Detecting conserved secondary structures in RNA molecules using constrained structural alignment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Recruitment of mRNAs to cytoplasmic ribonucleoprotein granules in trypanosomes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Trypanosoma cruzi: analysis of the complete PUF RNA-binding protein family

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Messenger RNA processing sites in Trypanosoma brucei.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

A novel strategy to identify the location of necessary and sufficient cis-acting regulatory mRNA elements in trypanosomes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

NMR structural study of TcUBP1, a single RRM domain protein from Trypanosoma cruzi: contribution of a beta hairpin to RNA binding

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

RNA recognition motif-type RNA-binding proteins in Trypanosoma cruzi form a family involved in the interaction with specific transcripts in vivo.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

Transcripts coding for variant surface glycoproteins of Trypanosoma brucei have a short, identical exon at their 5' end.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637893

A common pyrimidine-rich motif governs trans-splicing and polyadenylation of tubulin polycistronic pre-mRNA in trypanosomes

31 October 2018

1 reference

12 December 2020

Trypanosoma cruzi genome project: biological characteristics and molecular typing of clone CL Brener

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12 December 2020

Functional analysis of Trypanosoma brucei PUF1

1 reference

12 December 2020

Two yeast PUF proteins negatively regulate a single mRNA

1 reference

12 December 2020

Ribotrap : targeted purification of RNA-specific RNPs from cell lysates through immunoaffinity precipitation to identify regulatory proteins and RNAs

1 reference

12 December 2020

Control of mRNA degradation in trypanosomes

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2199-9-107

1 reference

Dimensions Publication ID

26 July 2017

0 references

1 reference

26 July 2017

1 reference