Allosteric signaling in the biotin repressor occurs via local folding coupled to global dampening of protein dynamics (Q33347360)

26 July 2017

title

Allosteric signaling in the biotin repressor occurs via local folding coupled to global dampening of protein dynamics (English)

1 reference

Catherine Clarke Fenselau

26 July 2017

0 references

4

object named as

Catherine C Fenselau

1 reference

26 July 2017

Olli Laine

1

1 reference

26 July 2017

Emily D Streaker

2

1 reference

26 July 2017

Maryam Nabavi

3

1 reference

26 July 2017

Dorothy Beckett

5

1 reference

26 July 2017

language of work or name

English

0 references

publication date

17 May 2008

1 reference

Journal of Molecular Biology

26 July 2017

published in

1 reference

26 July 2017

volume

381

1 reference

26 July 2017

issue

1

1 reference

26 July 2017

page(s)

89-101

1 reference

Allostery: absence of a change in shape does not imply that allostery is not at play

26 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Intrinsic disorder as a mechanism to optimize allosteric coupling in proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

The gatekeeper residue controls autoactivation of ERK2 via a pathway of intramolecular connectivity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Dynamically driven protein allostery.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Hydrogen exchange and mass spectrometry: A historical perspective

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Amide H/2H exchange reveals a mechanism of thrombin activation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Protein structure change studied by hydrogen-deuterium exchange, functional labeling, and mass spectrometry.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Evolutionarily conserved networks of residues mediate allosteric communication in proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Corepressor-induced organization and assembly of the biotin repressor: A model for allosteric activation of a transcriptional regulator

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Multiple disordered loops function in corepressor-induced dimerization of the biotin repressor.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Measurement of amide hydrogen exchange by MALDI-TOF mass spectrometry

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

MOLMOL: a program for display and analysis of macromolecular structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Evidence for distinct ligand-bound conformational states of the multifunctional Escherichia coli repressor of biotin biosynthesis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Determination of amide hydrogen exchange by mass spectrometry: a new tool for protein structure elucidation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Cooperative binding of the Escherichia coli repressor of biotin biosynthesis to the biotin operator sequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Comparison of Experimental Binding Data and Theoretical Models in Proteins Containing Subunits*

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Calculation of protein extinction coefficients from amino acid sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Escherichia coli biotin holoenzyme synthetase/bio repressor crystal structure delineates the biotin- and DNA-binding domains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Biotinyl 5'-adenylate: corepressor role in the regulation of the biotin genes of Escherichia coli K-12

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Nucleation of an allosteric response via ligand-induced loop folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Co-repressor induced order and biotin repressor dimerization: a case for divergent followed by convergent evolution

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Use of binding enthalpy to drive an allosteric transition

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Allosteric network of cAMP-dependent protein kinase revealed by mutation of Tyr204 in the P+1 loop

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

The biotin repressor: modulation of allostery by corepressor analogs

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Coupling of protein assembly and DNA binding: biotin repressor dimerization precedes biotin operator binding

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

The biotin repressor: thermodynamic coupling of corepressor binding, protein assembly, and sequence-specific DNA binding

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Disorder-order folding transitions underlie catalysis in the helicase motor of SecA

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2735192

Conformational analysis of Epac activation using amide hydrogen/deuterium exchange mass spectrometry

31 October 2018

1 reference

12 December 2020

Practical methods for deuterium exchange/mass spectrometry

1 reference

12 December 2020

The birA gene of Escherichia coli encodes a biotin holoenzyme synthetase

1 reference

12 December 2020

Genetic and biochemical characterization of the birA gene and its product: evidence for a direct role of biotin holoenzyme synthetase in repression of the biotin operon in Escherichia coli

1 reference

12 December 2020

Deuterium exchange mass spectrometry as a probe of protein kinase activation. Analysis of wild-type and constitutively active mutants of MAP kinase kinase-1

1 reference

12 December 2020

THE ENZYMATIC SYNTHESIS OF HOLOTRANSCARBOXYLASE FROM APOTRANSCARBOXYLASE AND (+)-BIOTIN. II. INVESTIGATION OF THE REACTION MECHANISM

1 reference

12 December 2020

10.1016/J.JMB.2008.05.018

Identifiers

DOI

1 reference

release_wymgny5cojhqlltg3o7u6zwraa

26 July 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/wymgny5cojhqlltg3o7u6zwraa

24 November 2022

mapped directly with Wikidata item

PMC publication ID

2735192

1 reference

26 July 2017

1 reference