Structural and functional genomics of tomato (Q33322302)

25 July 2017

1 reference

title

Structural and functional genomics of tomato (English)

1 reference

25 July 2017

0 references

1 reference

4

1 reference

25 July 2017

Amalia Barone

1

0 references

Maria Luisa Chiusano

object named as

Maria Luisa Chiusano

2

0 references

author name string

Maria Raffaella Ercolano

3

1 reference

PubMed ID

18317508

25 July 2017

Silvana Grandillo

5

1 reference

PubMed ID

18317508

25 July 2017

Luigi Frusciante

6

1 reference

25 July 2017

1 January 2008

1 reference

International Journal of Plant Genomics

25 July 2017

1 reference

25 July 2017

2008

1 reference

25 July 2017

820274

1 reference

Creative Commons Attribution 3.0 Unported

25 July 2017

start time

31 January 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

The Tomato Sequencing Project, the first cornerstone of the International Solanaceae Project (SOL).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

The construction of a Solanum habrochaites LYC4 introgression line population and the identification of QTLs for resistance to Botrytis cinerea.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Use of isogenic lines and simultaneous probing to identify DNA markers tightly linked to the tm-2a gene in tomato.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Heterosis: revisiting the magic

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

TomatEST database: in silico exploitation of EST data to explore expression patterns in tomato species

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Combining bioinformatics and phylogenetics to identify large sets of single-copy orthologous genes (COSII) for comparative, evolutionary and systematic studies: a test case in the euasterid plant clade

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Overdominant quantitative trait loci for yield and fitness in tomato

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Conservation of gene repertoire but not gene order in pepper and tomato

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

TOPAAS, a tomato and potato assembly assistance system for selection and finishing of bacterial artificial chromosomes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Euchromatin and pericentromeric heterochromatin: comparative composition in the tomato genome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

ParPEST: a pipeline for EST data analysis based on parallel computing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Coffee and tomato share common gene repertoires as revealed by deep sequencing of seed and cherry transcripts

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Comparative plant genomics resources at PlantGDB.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Genome-wide introgression lines and their use in genetic and molecular dissection of complex phenotypes in rice (Oryza sativa L.).

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

TILLING moves beyond functional genomics into crop improvement

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

The SOL Genomics Network: a comparative resource for Solanaceae biology and beyond

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Fruit-specific RNAi-mediated suppression of DET1 enhances carotenoid and flavonoid content in tomatoes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Efficient virus-induced gene silencing in roots using a modified tobacco rattle virus vector

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Unused natural variation can lift yield barriers in plant breeding

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Localization of jointless-2 gene in the centromeric region of tomato chromosome 12 based on high resolution genetic and physical mapping

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

EUGENE'HOM: A generic similarity-based gene finder using multiple homologous sequences

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Rfam: an RNA family database

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

BioMOBY: an open source biological web services proposal

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

The generic genome browser: a building block for a model organism system database

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Virus-induced gene silencing in tomato

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

A comparative genetic linkage map of eggplant (Solanum melongena) and its implications for genome evolution in the solanaceae

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Tomato mutants as tools for functional genomics

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Mapping a new frontier; development of integrated cytogenetic maps in plants

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Targeting induced local lesions IN genomes (TILLING) for plant functional genomics

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Genome mapping in capsicum and the evolution of genome structure in the solanaceae.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Localization of single- and low-copy sequences on tomato synaptonemal complex spreads using fluorescence in situ hybridization (FISH)

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Less-than-additive epistatic interactions of quantitative trait loci in tomato.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Two-dimensional spreads of synaptonemal complexes from solanaceous plants. VI. High-resolution recombination nodule map for tomato (Lycopersicon esculentum).

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

dbEST--database for "expressed sequence tags"

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

QTL analysis of transgressive segregation in an interspecific tomato cross

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Rapid identification of markers linked to a Pseudomonas resistance gene in tomato by using random primers and near-isogenic lines

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Molecular biology of fruit ripening and its manipulation with antisense genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

High density molecular linkage maps of the tomato and potato genomes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Development of a set of PCR-based anchor markers encompassing the tomato genome and evaluation of their usefulness for genetics and breeding experiments.

14 July 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

There is more to tomato fruit colour than candidate carotenoid genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

fw2.2: a quantitative trait locus key to the evolution of tomato fruit size

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Mapping quantitative trait loci in inbred backcross lines of Lycopersicon pimpinellifolium (LA1589).

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

RAP: a new computer program for de novo identification of repeated sequences in whole genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

In silico screening of a saturated mutation library of tomato

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Site-selected insertional mutagenesis of tomato with maize Ac and Ds elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Virus-induced gene silencing in tomato fruit

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

A modified viral satellite DNA that suppresses gene expression in plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Manipulation of the blue light photoreceptor cryptochrome 2 in tomato affects vegetative development, flowering time, and fruit antioxidant content.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Virus-induced gene silencing in Solanum species

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Virus-induced gene silencing is an effective tool for assaying gene function in the basal eudicot species Papaver somniferum (opium poppy).

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Efficient virus-induced gene silencing in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Agroinjection of tomato fruits. A tool for rapid functional analysis of transgenes directly in fruit.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Use of short microsatellites from database sequences to generate polymorphisms among Lycopersicon esculentum cultivars and accessions of other Lycopersicon species

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

Discovery of single nucleotide polymorphisms in Lycopersicon esculentum by computer aided analysis of expressed sequence tags

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

RFLP Maps Based on a Common Set of Clones Reveal Modes of Chromosomal Evolution in Potato and Tomato

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

High-throughput TILLING for Arabidopsis.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2246074

Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment length polymorphisms

31 October 2018

1 reference

https://api.crossref.org/works/10.1155%2F2008%2F820274

A library of Solanum lycopersicoides introgression lines in cultivated tomato

21 January 2018

1 reference

12 December 2020

Advanced backcross QTL analysis in a cross between an elite processing line of tomato and its wild relative L. pimpinellifolium

1 reference

12 December 2020

Expression of a truncated tomato polygalacturonase gene inhibits expression of the endogenous gene in transgenic plants

1 reference

12 December 2020

Real Time QTL of complex phenotypes in tomato interspecific introgression lines

1 reference

12 December 2020

Improving plant breeding with exotic genetic libraries

1 reference

12 December 2020

Development of a set of near isogenic and backcross recombinant inbred lines containing most of the Lycopersicon hirsutum genome in a L. esculentum genetic background: a tool for gene mapping and gene discovery

1 reference

12 December 2020

Advanced backcross QTL analysis: a method for the simultaneous discovery and transfer of valuable QTLs from unadapted germplasm into elite breeding lines

1 reference

12 December 2020

Technical advance: a high throughput system for transposon tagging and promoter trapping in tomato

1 reference

12 December 2020

Construction of a molecular linkage map of pepper and a comparison of synteny with tomato

1 reference

12 December 2020

A highly efficient transformation protocol for Micro-Tom, a model cultivar for tomato functional genomics

1 reference

12 December 2020

Identifiers

DOI

10.1155/2008/820274

1 reference

25 July 2017

1 reference

25 July 2017

1 reference

PubMed ID

18317508