In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches (Q33322197)

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English	In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches	scientific article

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scholarly article

1 reference

Europe PubMed Central

25 July 2017

In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches (English)

1 reference

Europe PubMed Central

25 July 2017

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

Alasdair J. Nisbet

object named as

Alasdair J Nisbet

3

0 references

Shoba Ranganathan

object named as

Shoba Ranganathan

4

0 references

Robin B. Gasser

object named as

Robin B Gasser

2

0 references

author name string

Shivashankar H Nagaraj

1

1 reference

Europe PubMed Central

25 July 2017

publication date

1 January 2008

1 reference

Europe PubMed Central

25 July 2017

BMC Bioinformatics

1 reference

Europe PubMed Central

25 July 2017

9 Suppl 1

1 reference

Europe PubMed Central

25 July 2017

S10

1 reference

Europe PubMed Central

25 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2105-9-s1-s10

0 references

A transcriptomic analysis of the adult stage of the bovine lungworm, Dictyocaulus viviparus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

28 July 2018

ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

28 July 2018

Trichostrongylus vitrinus (Nematoda: Strongylida): molecular characterization and transcriptional analysis of Tv-stp-1, a serine/threonine phosphatase gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

28 July 2018

RNA interference in parasitic helminths: current situation, potential pitfalls and future prospects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

28 July 2018

EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

28 July 2018

Testing the efficacy of RNA interference in Haemonchus contortus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

28 July 2018

The application of mass spectrometry to identify immunogenic components of excretory/secretory products from adult Dictyocaulus viviparus

1 reference

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Construction of gender-enriched cDNA archives for adult Oesophagostomum dentatum by suppressive-subtractive hybridization and a microarray analysis of expressed sequence tags

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28 July 2018

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Pyrophosphatase of the roundworm Ascaris suum plays an essential role in the worm's molting and development

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28 July 2018

ESTAP--an automated system for the analysis of EST data

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

28 July 2018

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28 July 2018

Drug resistance in veterinary helminths

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Improved prediction of signal peptides: SignalP 3.0

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Secretions of plant-parasitic nematodes: a molecular update

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28 July 2018

Profiling of gender-specific gene expression for Trichostrongylus vitrinus (Nematoda: Strongylida) by microarray analysis of expressed sequence tag libraries constructed by suppressive-subtractive hybridisation

1 reference

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The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics

1 reference

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28 July 2018

ESTAnnotator: A tool for high throughput EST annotation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

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Use of RNA interference to investigate gene function in the human filarial nematode parasite Brugia malayi.

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SimiTri--visualizing similarity relationships for groups of sequences

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Molecular aspects of sexual development and reproduction in nematodes and schistosomes.

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28 July 2018

Caenorhabditis elegans and the study of gene function in parasites

1 reference

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Gene ontology: tool for the unification of biology

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PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization

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A secretory cellulose-binding protein cDNA cloned from the root-knot nematode (Meloidogyne incognita).

1 reference

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A molecular evolutionary framework for the phylum Nematoda

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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Extending from PARs in Caenorhabditis elegans to homologues in Haemonchus contortus and other parasitic nematodes.

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31 October 2018

Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

31 October 2018

A hitchhiker's guide to expressed sequence tag (EST) analysis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259411

31 October 2018

WormBase: better software, richer content

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31 October 2018

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31 October 2018

Development of methods for RNA interference in the sheep gastrointestinal parasite, Trichostrongylus colubriformis.

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31 October 2018

RNA interference targeting cathepsin L and Z-like cysteine proteases of Onchocerca volvulus confirmed their essential function during L3 molting

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Signal sequence analysis of expressed sequence tags from the nematode Nippostrongylus brasiliensis and the evolution of secreted proteins in parasites

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A transcriptomic analysis of the phylum Nematoda

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31 October 2018

Caenorhabditis elegans Is a Nematode

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Suppression of secreted acetylcholinesterase expression in Nippostrongylus brasiliensis by RNA interference

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https://pubmed.ncbi.nlm.nih.gov/18315841

12 December 2020

based on heuristic

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Reverse genetic analysis of the Caenorhabditis elegans 26S proteasome subunits by RNA interference

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https://pubmed.ncbi.nlm.nih.gov/18315841

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genomics of nematodes

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https://pubmed.ncbi.nlm.nih.gov/18315841

12 December 2020

based on heuristic

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RNAi in Haemonchus contortus: a potential method for target validation

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https://pubmed.ncbi.nlm.nih.gov/18315841

12 December 2020

based on heuristic

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Identifiers

10.1186/1471-2105-9-S1-S10

1 reference

Europe PubMed Central

25 July 2017

DBLP publication ID

journals/bmcbi/NagarajGNR08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

25 July 2017

1 reference

Europe PubMed Central

25 July 2017

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