Protein conformations, interactions, and H/D exchange (Q33231178)

24 July 2017

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title

Protein conformations, interactions, and H/D exchange (English)

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24 July 2017

Claudia S Maier

1

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author name string

Max L Deinzer

series ordinal

2

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PubMed ID

16401514

24 July 2017

language of work or name

English

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publication date

1 January 2005

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24 July 2017

Methods in Enzymology

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24 July 2017

402

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24 July 2017

312-360

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The mass spectrometry of helical unfolding in peptides

24 July 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Microsecond to minute dynamics revealed by EX1-type hydrogen exchange at nearly every backbone hydrogen bond in a native protein

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Defining protein ensembles with native-state NH exchange: kinetics of interconversion and cooperative units from combined NMR and MS analysis

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Thermally induced hydrogen exchange processes in small proteins as seen by FTIR spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Primary structure effects on peptide group hydrogen exchange

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Insights into enzyme structure and dynamics elucidated by amide H/D exchange mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Touring the landscapes: partially folded proteins examined by hydrogen exchange

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Protein folding in the landscape perspective: chevron plots and non-Arrhenius kinetics

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen/Deuterium Exchange Mass Spectrometry of Actin in Various Biochemical Contexts

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen exchange properties of proteins in native and denatured states monitored by mass spectrometry and NMR.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen exchange and protein folding.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Naked Protein Conformations: Cytochrome c in the Gas Phase

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

1 reference

7 January 2021

Tertiary stability of native and methionine-80 modified cytochrome c detected by proton-deuterium exchange using on-line Fourier transform infrared spectroscopy

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Factors affecting gas-phase deuterium scrambling in peptide ions and their implications for protein structure determination.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen exchange demonstrates three domains in aldolase unfold sequentially

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Identification of unfolding domains in large proteins by their unfolding rates

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Comparison of continuous and pulsed labeling amide hydrogen exchange/mass spectrometry for studies of protein dynamics

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

From Levinthal to pathways to funnels

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Molecular Beams of Macroions

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Identification and localization of slow, natural, cooperative unfolding in the hematopoietic cell kinase SH3 domain by amide hydrogen exchange and mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Measurement and calibration of peptide group hydrogen-deuterium exchange by ultraviolet spectrophotometry

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Protein hydrogen exchange studied by the fragment separation method.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen exchange and structural dynamics of proteins and nucleic acids

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Mechanisms and uses of hydrogen exchange

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

On the pH dependence of amide proton exchange rates in proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Alkylation of Escherichia coli thioredoxin by S-(2-chloroethyl)glutathione and identification of the adduct on the active site cysteine-32 by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Methods to study protein dynamics and folding by mass spectrometry

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Kinetic Consequences of the Removal of a Disulfide Bridge on the Folding of Hen Lysozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Electrospray ionization for mass spectrometry of large biomolecules

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

New conformational properties induced by the replacement of Tyr-64 in Desulfovibrio vulgaris Hildenborough ferricytochrome c553 using isotopic exchanges monitored by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Study of the new stability properties induced by amino acid replacement of tyrosine 64 in cytochrome C553 from Desulfovibrio vulgaris Hildenborough using electrospray ionization mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Structural changes in cytochrome c upon hydrogen-deuterium exchange

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Anhydrous Protein Ions

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Is there hydrogen scrambling in the gas phase? Energetic and structural determinants of proton mobility within protein ions

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Kinetic intermediates in the folding of gaseous protein ions characterized by electron capture dissociation mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Activated ion electron capture dissociation for mass spectral sequencing of larger (42 kDa) proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Exchange of hydrogen atoms in insulin with deuterium atoms in aqueous solutions

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

On the evaporation of small ions from charged droplets

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Comparison of the hydrogen-exchange behavior of reduced and oxidized Escherichia coli thioredoxin.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Structural description of acid-denatured cytochrome c by hydrogen exchange and 2D NMR.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

NMR characterization of a single-cysteine mutant of Escherichia coli thioredoxin and a covalent thioredoxin-peptide complex

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Mass spectrometric measurement of changes in protein hydrogen exchange rates that result from point mutations

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Mass spectrometric measurement of protein amide hydrogen exchange rates of apo- and holo-myoglobin

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Laser desorption ionization of proteins with molecular masses exceeding 10,000 daltons

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Conformational changes in proteins probed by hydrogen-exchange electrospray-ionization mass spectrometry

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Fragmentation studies of peptides: the formation of y ions

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Site-specific amide hydrogen/deuterium exchange in E. coli thioredoxins measured by electrospray ionization mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Intramolecular interactions in chemically modified Escherichia coli thioredoxin monitored by hydrogen/deuterium exchange and electrospray ionization mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Conformational changes in chemically modified Escherichia coli thioredoxin monitored by H/D exchange and electrospray ionization mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Cytochrome c folding kinetics studied by time-resolved electrospray ionization mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Acid-induced unfolding of cytochrome c at different methanol concentrations: electrospray ionization mass spectrometry specifically monitors changes in the tertiary structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Equilibrium unfolding of proteins monitored by electrospray ionization mass spectrometry: distinguishing two-state from multi-state transitions

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Unfolding of proteins monitored by electrospray ionization mass spectrometry: a comparison of positive and negative ion modes

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Acid-induced denaturation of myoglobin studied by time-resolved electrospray ionization mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Protein folding and interactions revealed by mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

The hydrogen exchange core and protein folding.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Collisionally activated dissociation and tandem mass spectrometry of intact hemoglobin β-chain variant proteins with electrospray ionization

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Effect of reducing disulfide-containing proteins on electrospray ionization mass spectra

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Tandem mass spectrometry of very large molecules. 2. Dissociation of multiply charged proline-containing proteins from electrospray ionization

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Solvent-induced conformational changes of polypeptides probed by electrospray-ionization mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Conformational properties of the A-state of cytochrome c studied by hydrogen/deuterium exchange and electrospray mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Thermal denaturation of Escherichia coli thioredoxin studied by hydrogen/deuterium exchange and electrospray ionization mass spectrometry: monitoring a two-state protein unfolding transition

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Solvent accessibility of the thrombin-thrombomodulin interface

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Identification of protein-protein interfaces by decreased amide proton solvent accessibility

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Two-dimensional mass spectrometry of biomolecules at the subfemtomole level.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Investigation of protein folding by mass spectrometry.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Detection of transient protein folding populations by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Heat-induced conformational changes in proteins studied by electrospray ionization mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

A chemometric approach to detection and characterization of multiple protein conformers in solution using electrospray ionization mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Primary structure effects on peptide group hydrogen exchange.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Electrospray ionization mass spectrometry and hydrogen/deuterium exchange for probing the interaction of calmodulin with calcium.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Protein subunit interactions and structural integrity of amyloidogenic transthyretins: evidence from electrospray mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Probing the influence of mutations on the stability of a ferredoxin by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Deuterium exchange mass spectrometry as a probe of protein kinase activation. Analysis of wild-type and constitutively active mutants of MAP kinase kinase-1

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Modeling deuterium exchange behavior of ERK2 using pepsin mapping to probe secondary structure.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Mapping temperature-induced conformational changes in the Escherichia coli heat shock transcription factor sigma 32 by amide hydrogen exchange.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Conformation of GroEL-bound alpha-lactalbumin probed by mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Structural characterization of protein folding intermediates by proton magnetic resonance and hydrogen exchange

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Detection and selective dissociation of intact ribosomes in a mass spectrometer

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Collisional activation of large multiply charged ions using Fourier transform mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Protein Structurein Vacuo: Gas-Phase Conformations of BPTI and Cytochromec

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Probing the non-covalent structure of proteins by amide hydrogen exchange and mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

New mass spectrometric methods for the study of noncovalent associations of biopolymers

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Coexisting stable conformations of gaseous protein ions

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Electrospray Time-of-Flight Mass Spectrometry of the Intact MS2 Virus Capsid

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Detection of intact megaDalton protein assemblies of vanillyl-alcohol oxidase by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Probing metal ion binding and conformational properties of the colicin E9 endonuclease by electrospray ionization time-of-flight mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Detection of a Monomeric Intermediate Associated with Dimerization of Protein Hu by Mass Spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Two-dimensional 1H NMR studies of cytochrome c: hydrogen exchange in the N-terminal helix

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen exchange/electrospray ionization mass spectrometry studies of substrate and inhibitor binding and conformational changes of Escherichia coli dihydrodipicolinate reductase

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Conformational and dynamic changes of Yersinia protein tyrosine phosphatase induced by ligand binding and active site mutation and revealed by H/D exchange and electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Fourier transform ion cyclotron resonance mass spectrometric detection of small Ca(2+)-induced conformational changes in the regulatory domain of human cardiac troponin C

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen exchange-mass spectrometry: optimization of digestion conditions

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Downsizing improves sensitivity 100-fold for hydrogen exchange-mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Kinetic unfolding mechanism of the inducible nitric oxide synthase oxygenase domain determined by time-resolved electrospray mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Gas-phase folding and unfolding of cytochrome c cations.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen exchange and the dynamic structure of proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Characterization of Cytochrome c Variants with High-Resolution FTICR Mass Spectrometry: Correlation of Fragmentation and Structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Dynamics and ligand-induced solvent accessibility changes in human retinoid X receptor homodimer determined by hydrogen deuterium exchange and mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Mass spectrometric approaches using electrospray ionization charge states and hydrogen-deuterium exchange for determining protein structures and their conformational changes

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen/deuterium exchange and mass spectrometric analysis of a protein containing multiple disulfide bonds: Solution structure of recombinant macrophage colony stimulating factor-beta (rhM-CSFbeta)

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Direct evidence for a two-state protein unfolding transition from hydrogen-deuterium exchange, mass spectrometry, and NMR.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Structural comparison of recombinant human macrophage colony stimulating factor beta and a partially reduced derivative using hydrogen deuterium exchange and electrospray ionization mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Peptide models of helical hydrophobic transmembrane segments of membrane proteins. 1. Studies of the conformation, intrabilayer orientation, and amide hydrogen exchangeability of Ac-K2-(LA)12-K2-amide

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Human recombinant [C22A] FK506-binding protein amide hydrogen exchange rates from mass spectrometry match and extend those from NMR

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

A universal algorithm for fast and automated charge state deconvolution of electrospray mass-to-charge ratio spectra.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Amide hydrogen exchange determined by mass spectrometry: application to rabbit muscle aldolase

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Determination of amide hydrogen exchange by mass spectrometry: a new tool for protein structure elucidation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Quantification of Protein−Ligand Interactions by Mass Spectrometry, Titration, and H/D Exchange: PLIMSTEX

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Modeling data from titration, amide H/D exchange, and mass spectrometry to obtain protein-ligand binding constants

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Probing Ca2+-induced conformational changes in porcine calmodulin by H/D exchange and ESI-MS: effect of cations and ionic strength

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

Hydrogen Exchange in Proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2902010-0

7 January 2021

10.1016/S0076-6879(05)02010-0

Identifiers

DOI

1 reference

release_v2k4d46dwfch7i5vobdky3hpo4

24 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/v2k4d46dwfch7i5vobdky3hpo4

24 November 2022

mapped directly with Wikidata item

PubMed ID

16401514

1 reference

PubMed ID

16401514