Application of molecular genetic methods in diagnostics and epidemiology of food-borne bacterial pathogens (Q33210667)

23 July 2017

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title

Application of molecular genetic methods in diagnostics and epidemiology of food-borne bacterial pathogens (English)

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23 July 2017

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Susanna Lukinmaa

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23 July 2017

Ulla-Maija Nakari

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2

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23 July 2017

Marjut Eklund

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3

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23 July 2017

Anja Siitonen

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4

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23 July 2017

1 November 2004

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Acta Pathologica et Microbiologica Scandinavica

23 July 2017

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23 July 2017

112

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23 July 2017

11-12

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23 July 2017

908-929

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Trends in indigenous foodborne disease and deaths, England and Wales: 1992 to 2000.

23 July 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Sporadic cases of haemolytic-uraemic syndrome associated with faecal cytotoxin and cytotoxin-producing Escherichia coli in stools

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Reactive arthritis following an outbreak of Salmonella Bovismorbificans infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Short and long term mortality associated with foodborne bacterial gastrointestinal infections: registry based study

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Domestically acquired Campylobacter infections in Finland

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Listeria monocytogenes isolates from invasive infections: variation of sero- and genotypes during an 11-year period in Finland

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Clinical isolates of non-O157 Shiga toxin-producing Escherichia coli: serotypes, virulence characteristics, and molecular profiles of strains of the same serotype

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Sorbitol-fermenting Shiga toxin-producing Escherichia coli O157:H(-) strains: epidemiology, phenotypic and molecular characteristics, and microbiological diagnosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

A widespread outbreak of Yersinia pseudotuberculosis O:3 infection from iceberg lettuce

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Multiple outbreaks of Yersinia pseudotuberculosis infections in Finland

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Technical improvement to prevent DNA degradation of enteric pathogens in pulsed-field gel electrophoresis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Interlaboratory random amplified polymorphic DNA typing of Yersinia enterocolitica and Y. enterocolitica-like bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Quantitative detection of Listeria monocytogenes and Listeria innocua by real-time PCR: assessment of hly, iap, and lin02483 targets and AmpliFluor technology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Improvement in the detection rate of diarrhoeagenic bacteria in human stool specimens by a rapid real-time PCR assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

A broad-spectrum probe for molecular epidemiology of bacteria: ribosomal RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Bacterial phylogeny based on 16S and 23S rRNA sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Molecular typing of Salmonella serotypes prevalent in animals in England: assessment of methodology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

A national outbreak of multi-resistant Salmonella enterica serovar Typhimurium definitive phage type (DT) 104 associated with consumption of lettuce.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Comparative analysis of multilocus sequence typing and pulsed-field gel electrophoresis for characterizing Listeria monocytogenes strains isolated from environmental and clinical sources

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Multilocus sequence typing for characterization of clinical and environmental salmonella strains

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

DNA fingerprinting of Salmonella enterica subsp. enterica serovar typhimurium with emphasis on phage type DT104 based on variable number of tandem repeat loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

A polymorphic tandem repeat potentially useful for typing in the chromosome of Yersinia enterocolitica

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Molecular typing of Salmonella enterica serovar typhi isolates from various countries in Asia by a multiplex PCR assay on variable-number tandem repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Multilocus variable-number tandem repeat analysis distinguishes outbreak and sporadic Escherichia coli O157:H7 isolates

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Chips with everything: DNA microarrays in infectious diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Microarray-based identification of thermophilic Campylobacter jejuni, C. coli, C. lari, and C. upsaliensis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Discrimination among Listeria monocytogenes isolates using a mixed genome DNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Characterization of Salmonella enterica subspecies I genovars by use of microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Salmonella enteritidis in Italy

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

[Biochemical and molecular characterization of Salmonella serovar enteritidis phage type 4 isolated from food poisoning outbreaks in Tokyo].

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Subtyping of Salmonella enterica serotype enteritidis strains by manual and automated PstI-SphI ribotyping

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Molecular epidemiology of an outbreak caused by Salmonella enterica serovar Newport in Finland and the United Kingdom

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Salmonella in alfalfa sprouts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Direct detection and characterization of Shiga toxigenic Escherichia coli by multiplex PCR for stx1, stx2, eae, ehxA, and saa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Real-time fluorescence PCR assays for detection and characterization of Shiga toxin, intimin, and enterohemolysin genes from Shiga toxin-producing Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Detection by 5'-nuclease PCR of Shiga-toxin producing Escherichia coli O26, O55, O91, O103, O111, O113, O145 and O157:H7, associated with the world's most frequent clinical cases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Clinical Escherichia coli strains carrying stx genes: stx variants and stx-positive virulence profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Phage types and genotypes of Shiga toxin-Producing Escherichia coli O157 in Finland

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Use of phenotyping and genotyping to verify transmission of Escherichia coli O157:H7 from dairy farms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Comparison of genotypes and serotypes of Campylobacter jejuni isolated from Danish wild mammals and birds and from broiler flocks and humans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Comparative genotyping of Campylobacter jejuni by amplified fragment length polymorphism, multilocus sequence typing, and short repeat sequencing: strain diversity, host range, and recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Evidence for a genetically stable strain of Campylobacter jejuni

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Use of an open-reading frame-specific Campylobacter jejuni DNA microarray as a new genotyping tool for studying epidemiologically related isolates

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Large-scale comparative genomics meta-analysis of Campylobacter jejuni isolates reveals low level of genome plasticity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Development and application of a new scheme for typing Campylobacter jejuni and Campylobacter coli by PCR-based restriction fragment length polymorphism analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Detection and typing of Campylobacter jejuni and Campylobacter coli and analysis of indicator organisms in three waterborne outbreaks in Finland

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Temporal and geographical distribution and overlap of Penner heat-stable serotypes and pulsed-field gel electrophoresis genotypes of Campylobacter jejuni isolates collected from humans and chickens in Finland during a seasonal peak

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Ribotyping characterisation of campylobacter isolates randomly collected from different sources in Italy

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Amplified fragment length polymorphism analysis of Campylobacter jejuni strains isolated from chickens and from patients with gastroenteritis or Guillain-Barré or Miller Fisher syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Fluorescent amplified fragment length polymorphism genotyping of Campylobacter jejuni and Campylobacter coli strains and its relationship with host specificity, serotyping, and phage typing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Genomic investigation of phenotypic variation in Campylobacter jejuni flagellin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Listeria monocytogenes Infection m Neonates: Investigation of an Epidemic

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Risk factors for L. monocytogenes contamination of dairy products in Switzerland, 1990-1999.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Elucidation of Listeria monocytogenes contamination routes in cold-smoked salmon processing plants detected by DNA-based typing methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Genomic fingerprinting of 80 strains from the WHO multicenter international typing study of listeria monocytogenes via pulsed-field gel electrophoresis (PFGE).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Diversity of Listeria monocytogenes isolates of human and food origin studied by serotyping, automated ribotyping and pulsed-field gel electrophoresis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Occurrence and typing of Listeria monocytogenes strains in retail vacuum-packed fish products and in a production plant

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Yersinia enterocolitica: overview and epidemiologic correlates

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Low Occurrence of Pathogenic Yersinia enterocolitica in Clinical, Food, and Environmental Samples: a Methodological Problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Efficient subtyping of Yersinia enterocolitica bioserotype 4/O:3 with pulsed-field gel electrophoresis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Evaluation of pulsed-field gel electrophoresis of genomic restriction fragments in the discrimination of Yersinia enterocolitica O:3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Correspondence of genotypes of sporadic Yersinia enterocolitica bioserotype 4/O:3 strains from human and porcine sources

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Factors promoting acute and chronic diseases caused by yersiniae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Molecular epidemiology of Clostridium perfringens related to food-borne outbreaks of disease in Finland from 1984 to 1999.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Genotyping of enterotoxigenic Clostridium perfringens fecal isolates associated with antibiotic-associated diarrhea and food poisoning in North America

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Multiple typing techniques applied to a Clostridium perfringens food poisoning outbreak

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

Amplified fragment length polymorphism (AFLP) analysis of Clostridium perfringens for epidemiological typing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

PulseNet: the molecular subtyping network for foodborne bacterial disease surveillance, United States

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0463.2004.APM11211-1213.X

10.1111/J.1600-0463.2004.APM11211-1213.X

21 January 2018

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DOI

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23 July 2017

1 reference