Use of 13C(alpha) chemical shifts for accurate determination of beta-sheet structures in solution (Q31145487)

16 August 2017

Use of 13C(alpha) chemical shifts for accurate determination of beta-sheet structures in solution (English)

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16 August 2017

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3

Harold A Scheraga

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16 August 2017

Jorge A Vila

1

1 reference

16 August 2017

Yelena A Arnautova

series ordinal

2

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16 August 2017

language of work or name

English

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publication date

4 February 2008

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Proceedings of the National Academy of Sciences of the United States of America

16 August 2017

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16 August 2017

105

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16 August 2017

6

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16 August 2017

1891-1896

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Factors affecting the use of 13C(alpha) chemical shifts to determine, refine, and validate protein structures

16 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Use of 13Calpha chemical shifts in protein structure determination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Parallel tempering molecular dynamics folding simulation of a signal peptide in explicit water

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

The RCI server: rapid and accurate calculation of protein flexibility using chemical shifts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Folding of proteins with diverse folds

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

A simple method to predict protein flexibility using secondary chemical shifts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Simultaneous determination of protein structure and dynamics.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Factors involved in the stability of isolated beta-sheets: Turn sequence, beta-sheet twisting, and hydrophobic surface burial

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Free energy landscape of protein folding in water: Explicit vs. implicit solvent

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Probability-based protein secondary structure identification using combined NMR chemical-shift data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Automated prediction of 15N, 13Calpha, 13Cbeta and 13C' chemical shifts in proteins using a density functional database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Native proteins are surface-molten solids: application of the Lindemann criterion for the solid versus liquid state

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

1H, 13C and 15N chemical shift referencing in biomolecular NMR

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Monte Carlo-minimization approach to the multiple-minima problem in protein folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Accessible surface areas as a measure of the thermodynamic parameters of hydration of peptides

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Variable-target-function and build-up procedures for the calculation of protein conformation. Application to bovine pancreatic trypsin inhibitor using limited simulated nuclear magnetic resonance data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

WHAT IF: a molecular modeling and drug design program

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Improved efficiency of protein structure calculations from NMR data using the program DIANA with redundant dihedral angle constraints.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Predicting 13Calpha chemical shifts for validation of protein structures.

21 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0711022105

PROCHECK: a program to check the stereochemical quality of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0711022105

An assessment of the precision and accuracy of protein structures determined by NMR. Dependence on distance errors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0711022105

On the shortest spanning subtree of a graph and the traveling salesman problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0711022105

Application of the random coil index to studying protein flexibility

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2542864

Free energy surfaces of miniproteins with a betabetaalpha motif: replica exchange molecular dynamics simulation with an implicit solvation model

31 October 2018

1 reference

12 December 2020

Unblocked statistical-coil tetrapeptides and pentapeptides in aqueous solution: a theoretical study

1 reference

12 December 2020

NMR characterization of the dynamics of biomacromolecules

1 reference

12 December 2020

Refinement of the thrombin-bound structure of a hirudin peptide by a restrained electrostatically driven Monte Carlo method

1 reference

12 December 2020

Application of 1H NMR chemical shifts to measure the quality of protein structures

1 reference

12 December 2020

Model-free approach beyond the borders of its applicability

1 reference

12 December 2020

Effects of side-chain orientation on the 13C chemical shifts of antiparallel beta-sheet model peptides

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0711022105

1 reference

16 August 2017

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1 reference

16 August 2017

PubMed publication ID

18250334

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