Optimization of cell lines as tumour models by integrating multi-omics data. (Q31134293)

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24 March 2020

review article

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title

Optimization of cell lines as tumour models by integrating multi-omics data (English)

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24 March 2020

1

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24 March 2020

author name string

Yongjing Liu

2

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24 March 2020

Yunzhen Wei

3

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24 March 2020

Zichuang Yan

4

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24 March 2020

Qiang Zhang

5

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24 March 2020

Cheng Wu

6

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24 March 2020

Zhiqiang Chang

7

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24 March 2020

Yan Xu

8

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24 March 2020

publication date

1 May 2017

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Briefings in Bioinformatics

24 March 2020

published in

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24 March 2020

volume

18

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24 March 2020

page(s)

515-529

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issue

3

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Comparative lesion sequencing provides insights into tumor evolution

24 March 2020

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A primary xenograft model of small-cell lung cancer reveals irreversible changes in gene expression imposed by culture in vitro

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Do cell lines in vitro reflect the properties of the tumours of origin? A study of lines derived from human melanoma xenografts

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Evaluating cell lines as tumour models by comparison of genomic profiles

21 January 2018

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Assessing the prevalence of mycoplasma contamination in cell culture via a survey of NCBI's RNA-seq archive

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Emerging landscape of oncogenic signatures across human cancers

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Combinatorial patterns of somatic gene mutations in cancer

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Comprehensive molecular characterization of human colon and rectal cancer

21 January 2018

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The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity

21 January 2018

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NCBI GEO: archive for functional genomics data sets--update

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COSMIC: exploring the world's knowledge of somatic mutations in human cancer

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Phenopedia and Genopedia: disease-centered and gene-centered views of the evolving knowledge of human genetic associations

21 January 2018

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GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers

21 January 2018

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Profiling critical cancer gene mutations in clinical tumor samples

21 January 2018

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Adjustment of systematic microarray data biases

21 January 2018

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Empirical comparison of cross-platform normalization methods for gene expression data

21 January 2018

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Inference of modules associated to eQTLs

21 January 2018

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Patient-specific driver gene prediction and risk assessment through integrated network analysis of cancer omics profiles.

21 January 2018

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Combined analysis of gene expression, DNA copy number, and mutation profiling data to display biological process anomalies in individual breast cancers.

21 January 2018

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Recommendation of short tandem repeat profiling for authenticating human cell lines, stem cells, and tissues

21 January 2018

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Authentication of newly established human esophageal squamous cell carcinoma cell line (YM-1) using short tandem repeat (STR) profiling method

21 January 2018

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Genetic profiling reveals an alarming rate of cross-contamination among human cell lines used in China

21 January 2018

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Hiding in plain view: genetic profiling reveals decades old cross contamination of bladder cancer cell line KU7 with HeLa

21 January 2018

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Genetic profiling reveals cross-contamination and misidentification of 6 adenoid cystic carcinoma cell lines: ACC2, ACC3, ACCM, ACCNS, ACCS and CAC2.

21 January 2018

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Cell line identity finding by fingerprinting, an optimized resource for short tandem repeat profile authentication

21 January 2018

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High-throughput SNP-based authentication of human cell lines

21 January 2018

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Deoxyribonucleic acid profiling analysis of 40 human thyroid cancer cell lines reveals cross-contamination resulting in cell line redundancy and misidentification

21 January 2018

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21 January 2018

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Analysis of p53 mutation status in human cancer cell lines: a paradigm for cell line cross-contamination

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

Identifiers

DOI

10.1093/BIB/BBW082

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27694350%20AND%20SRC:MED&resulttype=core&format=json

journals/bib/ZhaoLWYZWCX17

24 March 2020

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

1 reference