plasmidSPAdes: assembling plasmids from whole genome sequencing data (Q31118045)

29 June 2017

plasmidSPAdes: assembling plasmids from whole genome sequencing data (English)

1 reference

29 June 2017

whole genome sequencing

1 reference

5

Alla Lapidus

0 references

Pavel A. Pevzner

6

object named as

Pavel A Pevzner

1 reference

29 June 2017

Dmitry Antipov

1

1 reference

29 June 2017

Nolan Hartwick

2

1 reference

29 June 2017

Max Shen

3

1 reference

29 June 2017

Mikhail Raiko

4

1 reference

29 June 2017

language of work or name

English

0 references

publication date

27 July 2016

1 reference

29 June 2017

8

1 reference

based on heuristic

inferred from page(s)

published in

Bioinformatics

1 reference

29 June 2017

32

1 reference

29 June 2017

22

1 reference

29 June 2017

3380-3387

1 reference

Bacterial clade with the ribosomal RNA operon on a small plasmid rather than the chromosome

29 June 2017

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

The RAST Server: rapid annotations using subsystems technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Plasmid Diversity and Adaptation Analyzed by Massive Sequencing of Escherichia coli Plasmids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

QUAST: quality assessment tool for genome assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Insights into the bovine rumen plasmidome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Growth dynamics of gut microbiota in health and disease inferred from single metagenomic samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Reducing assembly complexity of microbial genomes with single-molecule sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Plasmid flux in Escherichia coli ST131 sublineages, analyzed by plasmid constellation network (PLACNET), a new method for plasmid reconstruction from whole genome sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

De novo repeat classification and fragment assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

ExSPAnder: a universal repeat resolver for DNA fragment assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Genomics of microbial plasmids: classification and identification based on replication and transfer systems and host taxonomy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

Facile recovery of individual high-molecular-weight, low-copy-number natural plasmids for genomic sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

New approaches for unravelling reassortment pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW493

10.1093/BIOINFORMATICS/BTW493

21 January 2018

Identifiers

DOI

0 references

DBLP publication ID

journals/bioinformatics/AntipovHSRLP16

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference