Extracting binary signals from microarray time-course data (Q31113375)

11 August 2017

Extracting binary signals from microarray time-course data (English)

1 reference

11 August 2017

2

David L Dill

1 reference

11 August 2017

3

Rob Tibshirani

1 reference

11 August 2017

4

Sylvia K Plevritis

1 reference

11 August 2017

Debashis Sahoo

1

1 reference

PMCID

1920252

11 August 2017

language of work or name

English

0 references

publication date

21 May 2007

1 reference

11 August 2017

Nucleic Acids Research

1 reference

11 August 2017

35

1 reference

11 August 2017

3705-3712

1 reference

11 August 2017

11

1 reference

A data-driven clustering method for time course gene expression data.

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

ErmineJ: tool for functional analysis of gene expression data sets

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Significance analysis of time course microarray experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

WebGestalt: an integrated system for exploring gene sets in various biological contexts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Clustering short time series gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

A practical false discovery rate approach to identifying patterns of differential expression in microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Homeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Java Treeview--extensible visualization of microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Analyzing time series gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Gene expression signature of fibroblast serum response predicts human cancer progression: similarities between tumors and wounds

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Continuous representations of time-series gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Comparing the continuous representation of time-series expression profiles to identify differentially expressed genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Statistical significance for genomewide studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Using hidden Markov models to analyze gene expression time course data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Clustering of time-course gene expression data using a mixed-effects model with B-splines

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

The Stanford Microarray Database: data access and quality assessment tools

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Cluster analysis of gene expression dynamics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Binary analysis and optimization-based normalization of gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Analysis techniques for microarray time-series data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Missing value estimation methods for DNA microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Aligning gene expression time series with time warping algorithms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Gene ontology: tool for the unification of biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

Cluster analysis and display of genome-wide expression patterns

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1920252

A multi-step approach to time series analysis and gene expression clustering.

21 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM284

The Graphical Query Language: a tool for analysis of gene expression time-courses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM284

Time ordering of gene coexpression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM284

Extracting transcriptional events from temporal gene expression patterns during Dictyostelium development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM284

Identifying genes from up-down properties of microarray expression series.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM284

Statistical tests for identifying differentially expressed genes in time-course microarray experiments

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17517782

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM284

1 reference

release_c4pgz4jmd5br7nw5ef2rawwcle

11 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/c4pgz4jmd5br7nw5ef2rawwcle

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

1920252

1 reference

11 August 2017

1 reference

PMCID

1920252