Inferring gene-phenotype associations via global protein complex network propagation (Q31025966)

10 October 2017

Inferring gene-phenotype associations via global protein complex network propagation (English)

1 reference

10 October 2017

1 reference

1 reference

Peng Yang

1

1 reference

10 October 2017

Xiaoli Li

2

1 reference

10 October 2017

Min Wu

3

1 reference

10 October 2017

Chee-Keong Kwoh

4

1 reference

10 October 2017

See-Kiong Ng

5

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10 October 2017

language of work or name

English

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publication date

25 July 2011

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10 October 2017

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10 October 2017

6

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10 October 2017

7

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10 October 2017

e21502

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Creative Commons Attribution 4.0 International

10 October 2017

start time

25 July 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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1 reference

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Joint genetic analysis of gene expression data with inferred cellular phenotypes

21 June 2018

1 reference

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Literature mining for the discovery of hidden connections between drugs, genes and diseases

21 June 2018

1 reference

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Bayesian approach to transforming public gene expression repositories into disease diagnosis databases

21 June 2018

1 reference

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Computational approaches for detecting protein complexes from protein interaction networks: a survey

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Associating genes and protein complexes with disease via network propagation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Detecting disease associated modules and prioritizing active genes based on high throughput data

21 June 2018

1 reference

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Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network

21 June 2018

1 reference

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LMO4 is an essential mediator of ErbB2/HER2/Neu-induced breast cancer cell cycle progression

21 June 2018

1 reference

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A core-attachment based method to detect protein complexes in PPI networks

21 June 2018

1 reference

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BioMart Central Portal--unified access to biological data

21 June 2018

1 reference

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Protein acetylation and histone deacetylase expression associated with malignant breast cancer progression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

The implications of human metabolic network topology for disease comorbidity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Germline mutation in RNASEL predicts increased risk of head and neck, uterine cervix and breast cancer

21 June 2018

1 reference

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Network-based global inference of human disease genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Protein networks in disease

21 June 2018

1 reference

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Walking the interactome for prioritization of candidate disease genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

A rare mutation in ABCC8/SUR1 leading to altered ATP-sensitive K+ channel activity and beta-cell glucose sensing is associated with type 2 diabetes in adults

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

CtIP silencing as a novel mechanism of tamoxifen resistance in breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

CORUM: the comprehensive resource of mammalian protein complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Genetic variants and haplotype analyses of the ZBRK1/ZNF350 gene in high-risk non BRCA1/2 French Canadian breast and ovarian cancer families.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

The human disease network

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Mendelian Inheritance in Man and its online version, OMIM

21 June 2018

1 reference

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A human phenome-interactome network of protein complexes implicated in genetic disorders

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

The modular nature of genetic diseases.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Diabetes-induced extracellular matrix protein expression is mediated by transcription coactivator p300

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Gene prioritization through genomic data fusion

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Disease gene discovery through integrative genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

From syndrome families to functional genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Candidate gene association study in type 2 diabetes indicates a role for genes involved in beta-cell function as well as insulin action

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Development of human protein reference database as an initial platform for approaching systems biology in humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

GeneCards: a novel functional genomics compendium with automated data mining and query reformulation support

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

The role of MMAC1 mutations in early-onset breast cancer: causative in association with Cowden syndrome and excluded in BRCA1-negative cases.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

Genome-wide inferring gene-phenotype relationship by walking on the heterogeneous network.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0021502

Align human interactome with phenome to identify causative genes and networks underlying disease families.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0021502

Predicting disease genes using protein-protein interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0021502

Estimation of Sparse Jacobian Matrices and Graph Coloring Blems

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0021502

Reduced expression of sarcospan in muscles of Fukuyama congenital muscular dystrophy.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3143124

A text-mining analysis of the human phenome

25 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21799737

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0021502

1 reference

10 October 2017

0 references

1 reference

10 October 2017

1 reference