Enlarged Multilocus Data set Provides Surprisingly Younger Time of Origin for the Plethodontidae, the Largest Family of Salamanders (Q30994602)

28 June 2017

Enlarged Multilocus Data set Provides Surprisingly Younger Time of Origin for the Plethodontidae, the Largest Family of Salamanders (English)

1 reference

28 June 2017

Plethodontidae

1 reference

Xing-Xing Shen

1

0 references

author name string

Dan Liang

2

1 reference

28 June 2017

Meng-Yun Chen

3

1 reference

28 June 2017

Rong-Li Mao

4

1 reference

28 June 2017

David B Wake

5

1 reference

28 June 2017

Peng Zhang

6

1 reference

28 June 2017

language of work or name

1 reference

18 September 2015

1 reference

28 June 2017

1 reference

28 June 2017

65

1 reference

28 June 2017

1

1 reference

28 June 2017

66-81

1 reference

Molecular phylogeny and divergence time estimates for major rodent groups: evidence from multiple genes

28 June 2017

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Paleontological evidence to date the tree of life

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Heterochrony repolarized: a phylogenetic analysis of developmental timing in plethodontid salamanders

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Biogeography and body size shuffling of aquatic salamander communities on a shifting refuge

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

jModelTest 2: more models, new heuristics and parallel computing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

The impact of the rate prior on Bayesian estimation of divergence times with multiple Loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

BEAST: Bayesian evolutionary analysis by sampling trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

The Amphibian Tree of Life

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Late Jurassic salamanders from northern China

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Earliest known crown-group salamanders

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Can parallel diversification occur in sympatry? Repeated patterns of body-size evolution in coexisting clades of North American salamanders

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

A maximum pseudo-likelihood approach for estimating species trees under the coalescent model

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

A model of evolution and structure for multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Discovery of the first Asian plethodontid salamander.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Morphological homoplasy, life history evolution, and historical biogeography of plethodontid salamanders inferred from complete mitochondrial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Evolutionary rates, divergence dates, and the performance of mitochondrial genes in Bayesian phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Estimating divergence dates and evaluating dating methods using phylogenomic and mitochondrial data in squamate reptiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Resolution of ray-finned fish phylogeny and timing of diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

A likelihood method for assessing molecular divergence time estimates and the placement of fossil calibrations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Divergence time estimation using fossils as terminal taxa and the origins of Lissamphibia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Biogeographic analysis reveals ancient continental vicariance and recent oceanic dispersal in amphibians.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

A large-scale phylogeny of Amphibia including over 2800 species, and a revised classification of extant frogs, salamanders, and caecilians

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Global patterns of diversification in the history of modern amphibians

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

A versatile and highly efficient toolkit including 102 nuclear markers for vertebrate phylogenomics, tested by resolving the higher level relationships of the caudata

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

CONSEL: for assessing the confidence of phylogenetic tree selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Placental mammal diversification and the Cretaceous-Tertiary boundary

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

The Eocene North Atlantic land bridge:its importance in Tertiary and modern phytogeography of the Northern Hemisphere

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Divergence time and evolutionary rate estimation with multilocus data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Rapid diversification and dispersal during periods of global warming by plethodontid salamanders

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

A multigenic perspective on phylogenetic relationships in the largest family of salamanders, the Plethodontidae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Global patterns of diversification and species richness in amphibians

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

PAML 4: phylogenetic analysis by maximum likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Trends, Rhythms, and Aberrations in Global Climate 65 Ma to Present

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Higher-level salamander relationships and divergence dates inferred from complete mitochondrial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Mitogenomic perspectives on the origin and phylogeny of living amphibians

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Exploring patterns and extent of bias in estimating divergence time from mitochondrial DNA sequence data in a particular lineage: a case study of salamanders (order Caudata).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

Characterization of the uncertainty of divergence time estimation under relaxed molecular clock models using multiple loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV061

21 January 2018

Identifiers

DOI

10.1093/SYSBIO/SYV061

1 reference

28 June 2017

1 reference