A Multivariate Computational Method to Analyze High-Content RNAi Screening Data (Q30843724)

18 October 2017

A Multivariate Computational Method to Analyze High-Content RNAi Screening Data (English)

1 reference

18 October 2017

multivariate statistics

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Scott Floyd

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

author name string

Jonathan Rameseder

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Yogesh Dayma

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Tobias Ehrenberger

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Mun Kyung Hwang

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Edoardo M Airoldi

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Michael B Yaffe

8

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10 June 2020

publication date

27 April 2015

1 reference

Journal of Biomolecular Screening

18 October 2017

1 reference

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10 June 2020

volume

20

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10 June 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

page(s)

985-997

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

Single-cell and multivariate approaches in genetic perturbation screens

10 June 2020

cites work

1 reference

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PKA-mediated phosphorylation of ATR promotes recruitment of XPA to UV-induced DNA damage.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Increasing the Content of High-Content Screening: An Overview

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

cAMP signaling inhibits radiation-induced ATM phosphorylation leading to the augmentation of apoptosis in human lung cancer cells

21 June 2018

1 reference

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A novel phenotypic dissimilarity method for image-based high-throughput screens.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Phospho-Ser/Thr-binding domains: navigating the cell cycle and DNA damage response

21 June 2018

1 reference

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A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes

21 June 2018

1 reference

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The bromodomain protein Brd4 insulates chromatin from DNA damage signalling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

RNAi screening reveals a large signaling network controlling the Golgi apparatus in human cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

STRING v9.1: protein-protein interaction networks, with increased coverage and integration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

SteinerNet: a web server for integrating 'omic' data to discover hidden components of response pathways.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Single-cell analysis of population context advances RNAi screening at multiple levels

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Clustering phenotype populations by genome-wide RNAi and multiparametric imaging.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Patterns of basal signaling heterogeneity can distinguish cellular populations with different drug sensitivities

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Inference of RhoGAP/GTPase regulation using single-cell morphological data from a combinatorial RNAi screen

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Integrating proteomic, transcriptional, and interactome data reveals hidden components of signaling and regulatory networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning

21 June 2018

1 reference

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Highly parallel identification of essential genes in cancer cells

21 June 2018

1 reference

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Robust hit identification by quality assurance and multivariate data analysis of a high-content, cell-based assay

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

The DNA damage response: ten years after

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Integrating high-content screening and ligand-target prediction to identify mechanism of action

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Quantitative morphological signatures define local signaling networks regulating cell morphology.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

21 June 2018

1 reference

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Molecular mechanisms of mammalian DNA repair and the DNA damage checkpoints

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Characterization of the cAMP-dependent protein kinase catalytic subunit Cgamma expressed and purified from sf9 cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5377593

Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs

21 June 2018

1 reference

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Systems survey of endocytosis by multiparametric image analysis.

21 June 2018

1 reference

https://api.crossref.org/works/10.1177%2F1087057115583037

Statistical Analysis of Terminal Extensions of Protein β-Strand Pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.1177%2F1087057115583037

Loss of PPP2R2A inhibits homologous recombination DNA repair and predicts tumor sensitivity to PARP inhibition.

21 January 2018

1 reference

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Hive plots--rational approach to visualizing networks.

21 January 2018

1 reference

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BRAF inhibitors: From the laboratory to clinical trials

21 January 2018

1 reference

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Image-based multivariate profiling of drug responses from single cells

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25918037

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1177/1087057115583037

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25918037%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

PubMed publication ID

25918037

1 reference