Investigation of Overhauser effects between pseudouridine and water protons in RNA helices (Q30724468)

13 September 2017

Investigation of Overhauser effects between pseudouridine and water protons in RNA helices (English)

1 reference

13 September 2017

Meredith I Newby

1

1 reference

PMCID

130523

13 September 2017

Nancy L Greenbaum

series ordinal

2

1 reference

PMCID

130523

13 September 2017

language of work or name

English

0 references

publication date

19 September 2002

1 reference

Proceedings of the National Academy of Sciences of the United States of America

13 September 2017

1 reference

13 September 2017

99

1 reference

13 September 2017

20

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13 September 2017

12697-12702

1 reference

Occurrence of 5-methylcytosine in nucleic acids

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Pseudouridine, a carbon-carbon linked ribonucleoside in ribonucleic acids: isolation, structure, and chemical characteristics.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

A conserved pseudouridine modification in eukaryotic U2 snRNA induces a change in branch-site architecture

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Pseudouridine in RNA: what, where, how, and why

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Unique structural and stabilizing roles for the individual pseudouridine residues in the 1920 region of Escherichia coli 23S rRNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Structural and functional roles of the N1- and N3-protons of psi at tRNA's position 39

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Localization of modified nucleotides in Schizosaccharomyces pombe spliceosomal small nuclear RNAs: modified nucleotides are clustered in functionally important regions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Simple, distortion-free homonuclear spectra of peptides and nucleic acids in water using excitation sculpting

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Stabilization of RNA stacking by pseudouridine

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Hydration sites in purine.purine.pyrimidine and pyrimidine.purine.pyrimidine DNA triplexes in aqueous solution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Properties of a U1/mRNA 5' splice site duplex containing pseudouridine as measured by thermodynamic and NMR methods.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Properties of pseudouridine N1 imino protons located in the major groove of an A-form RNA duplex

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Proton nuclear magnetic resonance investigations of fraying in double-stranded d-ApTpGpCpApT in aqueous solution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=130523

Gabor diffraction microscopy: the hologram as a generalized zone-plate

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.202477199

Clustering of pseudouridine residues around the peptidyltransferase center of yeast cytoplasmic and mitochondrial ribosomes.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.202477199

The importance of not saturating water in protein NMR. Application to sensitivity enhancement and NOE measurements

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.202477199

Studies on an isomer of uridine isolated from ribonucleic acids

21 January 2018

1 reference

12 December 2020

1H-15N NMR studies of Escherichia coli tRNA(Phe) from hisT mutants: a structural role for pseudouridine

1 reference

12 December 2020

Crystal structure of unmodified tRNA(Gln) complexed with glutaminyl-tRNA synthetase and ATP suggests a possible role for pseudo-uridines in stabilization of RNA structure

1 reference

12 December 2020

5-Ribosyl uracil, a carbon-carbon ribofuranosyl nucleoside in ribonucleic acids

1 reference

12 December 2020

Methylation studies on various uracil derivatives and on an isomer of uridine isolated from ribonucleic acids

1 reference

12 December 2020

Advanced 5'-silyl-2'-orthoester approach to RNA oligonucleotide synthesis

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.202477199

1 reference

13 September 2017

0 references

1 reference

13 September 2017

1 reference

PMCID

130523