Application of user-guided automated cytometric data analysis to large-scale immunoprofiling of invariant natural killer T cells (Q30689010)

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29 February 2020

title

Application of user-guided automated cytometric data analysis to large-scale immunoprofiling of invariant natural killer T cells (English)

1 reference

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29 February 2020

0 references

2

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29 February 2020

Soumya Raychaudhuri

8

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6

Philip L De Jager

1 reference

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29 February 2020

4

Buhm Han

1 reference

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29 February 2020

author name string

Xinli Hu

1

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29 February 2020

Patrick J Brennan

3

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29 February 2020

Clare M Baecher-Allan

5

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29 February 2020

Michael B Brenner

7

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29 February 2020

language of work or name

English

0 references

publication date

4 November 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24191009%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

29 February 2020

published in

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29 February 2020

volume

110

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issue

47

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29 February 2020

page(s)

19030-19035

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Critical assessment of automated flow cytometry data analysis techniques.

29 February 2020

cites work

1 reference

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Turned on by danger: activation of CD1d-restricted invariant natural killer T cells

14 July 2018

1 reference

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Unraveling the autoimmune translational research process layer by layer

14 July 2018

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Distinct and overlapping effector functions of expanded human CD4+, CD8α+ and CD4-CD8α- invariant natural killer T cells

14 July 2018

1 reference

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Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE

14 July 2018

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Screening: CyTOF-the next generation of cell detection

14 July 2018

1 reference

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Activation of the receptor NKG2D leads to production of Th17 cytokines in CD4+ T cells of patients with Crohn's disease.

14 July 2018

1 reference

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Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

14 July 2018

1 reference

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Rapid cell population identification in flow cytometry data

14 July 2018

1 reference

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A comprehensive ex vivo functional analysis of human NKT cells reveals production of MIP1-α and MIP1-β, a lack of IL-17, and a Th1-bias in males

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Misty Mountain clustering: application to fast unsupervised flow cytometry gating

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Skewed distribution of circulating activated natural killer T (NKT) cells in patients with common variable immunodeficiency disorders (CVID)

14 July 2018

1 reference

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Elucidation of seventeen human peripheral blood B-cell subsets and quantification of the tetanus response using a density-based method for the automated identification of cell populations in multidimensional flow cytometry data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Data reduction for spectral clustering to analyze high throughput flow cytometry data

14 July 2018

1 reference

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Highly multiparametric analysis by mass cytometry

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

The curvHDR method for gating flow cytometry samples.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Merging mixture components for cell population identification in flow cytometry

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Automated high-dimensional flow cytometric data analysis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Statistical mixture modeling for cell subtype identification in flow cytometry

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Automated gating of flow cytometry data via robust model-based clustering

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

14 July 2018

The biology of NKT cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Toward an understanding of NKT cell biology: progress and paradoxes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

CD1: antigen presentation and T cell function

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Functionally distinct subsets of CD1d-restricted natural killer T cells revealed by CD1d tetramer staining

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

CD1d-restricted and TCR-mediated activation of valpha14 NKT cells by glycosylceramides

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3839720

Seventeen-colour flow cytometry: unravelling the immune system

14 July 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24191009

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Characterization of human invariant natural killer T subsets in health and disease using a novel invariant natural killer T cell-clonotypic monoclonal antibody, 6B11

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24191009

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1318322110

1 reference

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29 February 2020

0 references

1 reference

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29 February 2020

PubMed publication ID

24191009

1 reference