Human Upf1 is a highly processive RNA helicase and translocase with RNP remodelling activities (Q30658061)

10 August 2017

Human Upf1 is a highly processive RNA helicase and translocase with RNP remodelling activities (English)

1 reference

10 August 2017

Hervé Le Hir

3

0 references

Vincent Croquette

object named as

Vincent Croquette

4

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author name string

Francesca Fiorini

1

1 reference

10 August 2017

Debjani Bagchi

2

1 reference

10 August 2017

Hervé Le Hir

3

1 reference

10 August 2017

language of work or name

English

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publication date

3 July 2015

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10 August 2017

Nature Communications

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10 August 2017

6

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10 August 2017

7581

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Creative Commons Attribution 4.0 International

10 August 2017

start time

3 July 2015

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

ImageQuant

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4506499/fullTextXML

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inferred from PubMed Central ID database lookup

cites work

A post-translational regulatory switch on UPF1 controls targeted mRNA degradation

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Organizing principles of mammalian nonsense-mediated mRNA decay

20 June 2018

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Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3' UTRs

20 June 2018

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Global analyses of UPF1 binding and function reveal expanded scope of nonsense-mediated mRNA decay

20 June 2018

1 reference

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Direct imaging of single UvrD helicase dynamics on long single-stranded DNA

20 June 2018

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Looking back on the birth of DEAD-box RNA helicases

20 June 2018

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How cells get the message: dynamic assembly and function of mRNA-protein complexes

20 June 2018

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Nonsense-mediated mRNA decay - mechanisms of substrate mRNA recognition and degradation in mammalian cells

20 June 2018

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Rules that govern UPF1 binding to mRNA 3' UTRs

20 June 2018

1 reference

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Tight intramolecular regulation of the human Upf1 helicase by its N- and C-terminal domains

20 June 2018

1 reference

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RNA helicases in splicing

20 June 2018

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Direct observation of stalled fork restart via fork regression in the T4 replication system.

20 June 2018

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NMD: a multifaceted response to premature translational termination

20 June 2018

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Ribosomal protein S1 unwinds double-stranded RNA in multiple steps

20 June 2018

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The cryo-EM structure of the UPF-EJC complex shows UPF1 poised toward the RNA 3' end.

20 June 2018

1 reference

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Human UPF1 interacts with TPP1 and telomerase and sustains telomere leading-strand replication

20 June 2018

1 reference

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mRNA helicases: the tacticians of translational control

20 June 2018

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Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2

20 June 2018

1 reference

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Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay

20 June 2018

1 reference

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Upf1 senses 3'UTR length to potentiate mRNA decay

20 June 2018

1 reference

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RNA helicases at work: binding and rearranging

20 June 2018

1 reference

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Magnetic tweezers for the study of DNA tracking motors.

20 June 2018

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SF1 and SF2 helicases: family matters

20 June 2018

1 reference

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Active and passive mechanisms of helicases

20 June 2018

1 reference

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Coupling DNA unwinding activity with primer synthesis in the bacteriophage T4 primosome

20 June 2018

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Single-molecule analysis reveals differential effect of ssDNA-binding proteins on DNA translocation by XPD helicase

20 June 2018

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Cytosolic viral sensor RIG-I is a 5'-triphosphate-dependent translocase on double-stranded RNA.

20 June 2018

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RecBCD enzyme and the repair of double-stranded DNA breaks

20 June 2018

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Translocation and unwinding mechanisms of RNA and DNA helicases

20 June 2018

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RNA primer handoff in bacteriophage T4 DNA replication: the role of single-stranded DNA-binding protein and polymerase accessory proteins

20 June 2018

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Non-hexameric DNA helicases and translocases: mechanisms and regulation

20 June 2018

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Structural insights into the exon junction complex

20 June 2018

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Real-time observation of bacteriophage T4 gp41 helicase reveals an unwinding mechanism

20 June 2018

1 reference

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NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity

20 June 2018

1 reference

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Direct measurements of the stabilization of single-stranded DNA under tension by single-stranded binding proteins

20 June 2018

1 reference

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NS3 helicase actively separates RNA strands and senses sequence barriers ahead of the opening fork

20 June 2018

1 reference

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Structure and mechanism of helicases and nucleic acid translocases

20 June 2018

1 reference

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The human RNA surveillance factor UPF1 is required for S phase progression and genome stability

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

RNA translocation and unwinding mechanism of HCV NS3 helicase and its coordination by ATP

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Opening of nucleic-acid double strands by helicases: active versus passive opening.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Mammalian Staufen1 recruits Upf1 to specific mRNA 3'UTRs so as to elicit mRNA decay

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Single-molecule assay reveals strand switching and enhanced processivity of UvrD

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Rent1, a trans-effector of nonsense-mediated mRNA decay, is essential for mammalian embryonic viability

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Characterization of the biochemical properties of the human Upf1 gene product that is involved in nonsense-mediated mRNA decay

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Uncoupling DNA translocation and helicase activity in PcrA: direct evidence for an active mechanism.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

DNA helicases displace streptavidin from biotin-labeled oligonucleotides

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Mechanical separation of the complementary strands of DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Escherichia coli single-strand deoxyribonucleic acid binding protein: stability, specificity, and kinetics of complexes with oligonucleotides and deoxyribonucleic acid

20 June 2018

1 reference

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Single-stranded DNA binding proteins required for DNA replication

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

Overexpression, purification, and characterization of recombinant T4 gene 32 protein22-301 (g32P-B).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4506499

The RNA helicase DHX34 activates NMD by promoting a transition from the surveillance to the decay-inducing complex

20 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8581

Robust translocation along a molecular monorail: the NS3 helicase from hepatitis C virus traverses unusually large disruptions in its track

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8581

Bipolar DNA translocation contributes to highly processive DNA unwinding by RecBCD enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8581

MOV10 Is a 5' to 3' RNA helicase contributing to UPF1 mRNA target degradation by translocation along 3' UTRs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8581

Influence of substrate composition on the helicase activity of transcription termination factor Rho: reduced processivity of Rho hexamers during unwinding of RNA-DNA hybrid regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8581

mRNP quality control goes regulatory

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8581

21 January 2018

Identifiers

DOI

10.1038/NCOMMS8581

1 reference

Dimensions Publication ID

10 August 2017

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0 references

1 reference

10 August 2017

1 reference