Visualization and correction of automated segmentation, tracking and lineaging from 5-D stem cell image sequences (Q30613676)

13 October 2017

Visualization and correction of automated segmentation, tracking and lineaging from 5-D stem cell image sequences (English)

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13 October 2017

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Eric Wait

1

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Mark Winter

object named as

Mark Winter

2

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Andrew R Cohen

object named as

Andrew R Cohen

8

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Sally Temple

7

object named as

Sally Temple

1 reference

13 October 2017

Chris Bjornsson

3

1 reference

13 October 2017

Erzsebet Kokovay

4

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13 October 2017

Yue Wang

5

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13 October 2017

Susan Goderie

6

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13 October 2017

3 October 2014

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13 October 2017

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13 October 2017

15

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13 October 2017

328

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https://scigraph.springernature.com/pub.10.1186/1471-2105-15-328

13 October 2017

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cites work

Segmentation of occluded hematopoietic stem cells from tracking

1 reference

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Bioimage Informatics in the context of Drosophila research

20 June 2018

1 reference

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Extensible visualization and analysis for multidimensional images using Vaa3D.

20 June 2018

1 reference

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Towards comprehensive cell lineage reconstructions in complex organisms using light-sheet microscopy

20 June 2018

1 reference

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Axonal transport analysis using Multitemporal Association Tracking

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

Vertebrate neural stem cell segmentation, tracking and lineaging with validation and editing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

Adult SVZ lineage cells home to and leave the vascular niche via differential responses to SDF1/CXCR4 signaling

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

A high-level 3D visualization API for Java and ImageJ

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

Robust adaptive 3-D segmentation of vessel laminae from fluorescence confocal microscope images and parallel GPU implementation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

Visualization of image data from cells to organisms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene expression in the developing C. elegans embryo

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

High resolution stereoscopic volume visualization of the mouse arginine vasopressin system.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

An interactive visualization tool for multi-channel confocal microscopy data in neurobiology research

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

Adult SVZ stem cells lie in a vascular niche: a quantitative analysis of niche cell-cell interactions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

A new detection algorithm for image analysis of single, fluorescence-labeled proteins in living cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

Subventricular zone astrocytes are neural stem cells in the adult mammalian brain

20 June 2018

1 reference

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A specialized vascular niche for adult neural stem cells.

20 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-15-328

Computational prediction of neural progenitor cell fates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-15-328

Using an adherent cell culture of the mouse subependymal zone to study the behavior of adult neural stem cells on a single-cell level.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-15-328

Automated cell lineage construction: a rapid method to analyze clonal development established with murine neural progenitor cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-15-328

The lineaging of fluorescently-labeled Caenorhabditis elegans embryos with StarryNite and AceTree.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-15-328

Automatic summarization of changes in biological image sequences using algorithmic information theory.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4287543

25 November 2018

Identifiers

DOI

10.1186/1471-2105-15-328

1 reference

journals/bmcbi/WaitWBKWGTC14

13 October 2017

1 reference

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

13 October 2017

1 reference