Computer aided manual validation of mass spectrometry-based proteomic data (Q30600225)

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26 February 2020

title

Computer aided manual validation of mass spectrometry-based proteomic data (English)

1 reference

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26 February 2020

5

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26 February 2020

author name string

Timothy G Curran

1

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26 February 2020

Bryan D Bryson

2

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26 February 2020

Michael Reigelhaupt

3

1 reference

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26 February 2020

Hannah Johnson

4

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26 February 2020

publication date

13 March 2013

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26 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23500044%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

volume

61

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26 February 2020

issue

3

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26 February 2020

page(s)

219-226

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A cross-platform toolkit for mass spectrometry and proteomics

26 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Molecular characterization of EGFR and EGFRvIII signaling networks in human glioblastoma tumor xenografts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Andromeda: a peptide search engine integrated into the MaxQuant environment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Integrated data management and validation platform for phosphorylated tandem mass spectrometry data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Prophossi: automating expert validation of phosphopeptide-spectrum matches from tandem mass spectrometry.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

MS/MS/MS reveals false positive identification of histone serine methylation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Manual validation of peptide sequence and sites of tyrosine phosphorylation from MS/MS spectra.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Modeling peptide fragmentation with dynamic Bayesian networks for peptide identification

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Assigning significance to peptides identified by tandem mass spectrometry using decoy databases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Using annotated peptide mass spectrum libraries for protein identification

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Probability-based protein identification by searching sequence databases using mass spectrometry data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

The potential cost of high-throughput proteomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700613

A probability-based approach for high-throughput protein phosphorylation analysis and site localization

26 November 2018

1 reference

Crossref

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.03.004

Universal and confident phosphorylation site localization using phosphoRS.

7 January 2021

1 reference

Crossref

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.03.004

Confident phosphorylation site localization using the Mascot Delta Score

7 January 2021

1 reference

Crossref

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.03.004

10.1016/J.YMETH.2013.03.004

7 January 2021

Identifiers

DOI

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26 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23500044%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23500044%20AND%20SRC:MED&resulttype=core&format=json