Detecting and estimating contamination of human DNA samples in sequencing and array-based genotype data (Q30574894)

13 August 2017

Detecting and estimating contamination of human DNA samples in sequencing and array-based genotype data (English)

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13 August 2017

6

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25 June 2017

Goo Jun

1

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Michael Boehnke

7

object named as

Michael Boehnke

1 reference

13 August 2017

Matthew Flickinger

2

1 reference

13 August 2017

Kurt N Hetrick

3

1 reference

13 August 2017

Jane M Romm

4

1 reference

13 August 2017

Kimberly F Doheny

5

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13 August 2017

Hyun Min Kang

8

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13 August 2017

language of work or name

English

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publication date

25 October 2012

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American Journal of Human Genetics

13 August 2017

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13 August 2017

91

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13 August 2017

839-848

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13 August 2017

5

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The metabochip, a custom genotyping array for genetic studies of metabolic, cardiovascular, and anthropometric traits

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

ContEst: estimating cross-contamination of human samples in next-generation sequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

Low-coverage sequencing: implications for design of complex trait association studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

Fast identification and removal of sequence contamination from genomic and metagenomic datasets

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

A map of human genome variation from population-scale sequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

Simultaneous genotype calling and haplotype phasing improves genotype accuracy and reduces false-positive associations for genome-wide association studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

GenoSNP: a variational Bayes within-sample SNP genotyping algorithm that does not require a reference population.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3487130

Increasing power for tests of genetic association in the presence of phenotype and/or genotype error by use of double-sampling

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23103226

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.AJHG.2012.09.004

1 reference

13 August 2017

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13 August 2017

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