In situ hybridization protocol for enhanced detection of gene expression in the planarian Schmidtea mediterranea (Q30538111)

15 August 2017

In situ hybridization protocol for enhanced detection of gene expression in the planarian Schmidtea mediterranea (English)

1 reference

15 August 2017

Schmidtea mediterranea

object named as

Schmidtea mediterranea

1 reference

Phillip A Newmark

2

0 references

author name string

Ryan S King

series ordinal

1

1 reference

15 August 2017

12 March 2013

1 reference

BMC Developmental Biology

15 August 2017

1 reference

15 August 2017

13

1 reference

15 August 2017

8

1 reference

PMCID

3610298

describes a project that uses

15 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3610298/fullTextXML

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1186/1471-213x-13-8

0 references

cites work

Stem cell systems and regeneration in planaria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

An RNAi screen reveals intestinal regulators of branching morphogenesis, differentiation, and stem cell proliferation in planarians

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

PRMT5 and the role of symmetrical dimethylarginine in chromatoid bodies of planarian stem cells.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Molecular markers to characterize the hermaphroditic reproductive system of the planarian Schmidtea mediterranea.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Regeneration of dopaminergic neurons after 6-hydroxydopamine-induced lesion in planarian brain.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Organizing the DV axis during planarian regeneration.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

A regulatory program for excretory system regeneration in planarians

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

The maintenance and regeneration of the planarian excretory system are regulated by EGFR signaling

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Two-color fluorescent in situ hybridization in the embryonic zebrafish brain using differential detection systems

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Stem cell-based growth, regeneration, and remodeling of the planarian intestine

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Clonogenic neoblasts are pluripotent adult stem cells that underlie planarian regeneration

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Multicolor fluorescent in situ hybridization to define abutting and overlapping gene expression in the embryonic zebrafish brain.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Planarian stem cells: a simple paradigm for regeneration.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Genome-wide analyses reveal a role for peptide hormones in planarian germline development

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Immunohistology--past, present, and future

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

A functional genomic screen in planarians identifies novel regulators of germ cell development

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

The Mi-2-like Smed-CHD4 gene is required for stem cell differentiation in the planarian Schmidtea mediterranea

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Wnt signaling and the polarity of the primary body axis.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Planarian Hh signaling regulates regeneration polarity and links Hh pathway evolution to cilia

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

The Zn finger protein Iguana impacts Hedgehog signaling by promoting ciliogenesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Emerging patterns in planarian regeneration

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Formaldehyde-based whole-mount in situ hybridization method for planarians

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Molecular analysis of stem cells and their descendants during cell turnover and regeneration in the planarian Schmidtea mediterranea

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Production and histological application of affinity-purified antibodies to heat-denatured green fluorescent protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Regeneration and maintenance of the planarian midline is regulated by a slit orthologue.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

nanos function is essential for development and regeneration of planarian germ cells.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

A quantitative evaluation of peroxidase inhibitors for tyramide signal amplification mediated cytochemistry and histochemistry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: analysis of ESTs from the hermaphroditic strain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Identification of genes needed for regeneration, stem cell function, and tissue homeostasis by systematic gene perturbation in planaria

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regeneration

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Not your father's planarian: a classic model enters the era of functional genomics.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

The C-terminal RG dipeptide repeats of the spliceosomal Sm proteins D1 and D3 contain symmetrical dimethylarginines, which form a major B-cell epitope for anti-Sm autoantibodies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Monoclonal antibodies to nucleic acid-containing cellular constituents: probes for molecular biology and autoimmune disease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Dissecting planarian central nervous system regeneration by the expression of neural-specific genes.

20 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

Reconstruction of dopaminergic neural network and locomotion function in planarian regenerates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

A planarian orthopedia homolog is specifically expressed in the branch region of both the mature and regenerating brain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

Expression pattern of the expanded noggin gene family in the planarian Schmidtea mediterranea

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

FISHing for chick genes: Triple-label whole-mount fluorescence in situ hybridization detects simultaneous and overlapping gene expression in avian embryos.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

The BMP pathway is essential for re-specification and maintenance of the dorsoventral axis in regenerating and intact planarians.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

Heat-induced antigen retrieval applied in zebrafish: whole-mount in situ immunofluorescence microscopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

Noggin and Noggin-Like Genes Control Dorsoventral Axis Regeneration in Planarians

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-213X-13-8

Whole-mount fluorescence in situ hybridization and antibody staining of Drosophila embryos.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610298

Rapid synthesis of biotin-, digoxigenin-, trinitrophenyl-, and fluorochrome-labeled tyramides and their application for In situ hybridization using CARD amplification

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23497040

12 December 2020

inferred from PubMed ID database lookup

Identification of immunological reagents for use in the study of freshwater planarians by means of whole-mount immunofluorescence and confocal microscopy

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23497040

12 December 2020

inferred from PubMed ID database lookup

Reduction of lipofuscin-like autofluorescence in fluorescently labeled tissue

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23497040

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-213X-13-8

1 reference

PMCID

3610298

Dimensions Publication ID

15 August 2017

0 references

1 reference

15 August 2017

1 reference

PMCID

3610298