From the gating charge response to pore domain movement: initial motions of Kv1.2 dynamics under physiological voltage changes (Q30493942)

15 September 2017

From the gating charge response to pore domain movement: initial motions of Kv1.2 dynamics under physiological voltage changes (English)

1 reference

15 September 2017

Elizabeth J Denning

1

1 reference

15 September 2017

Paul S Crozier

series ordinal

2

1 reference

15 September 2017

Jonathan N Sachs

series ordinal

3

1 reference

15 September 2017

Thomas B Woolf

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4

1 reference

15 September 2017

1 December 2009

1 reference

Molecular Membrane Biology

15 September 2017

1 reference

15 September 2017

26

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15 September 2017

8

1 reference

15 September 2017

397-421

1 reference

All-atom empirical potential for molecular modeling and dynamics studies of proteins

15 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Conformational changes and slow dynamics through microsecond polarized atomistic molecular simulation of an integral Kv1.2 ion channel

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Kv channel gating requires a compatible S4-S5 linker and bottom part of S6, constrained by non-interacting residues

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

The membrane potential and its representation by a constant electric field in computer simulations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Double bilayers and transmembrane gradients: a molecular dynamics study of a highly charged peptide

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Molecular dynamics simulation of Kv channel voltage sensor helix in a lipid membrane with applied electric field

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Molecular dynamics simulation of the Escherichia coli NikR protein: equilibrium conformational fluctuations reveal interdomain allosteric communication pathways

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Membrane proteins: molecular dynamics simulations.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

How membrane proteins sense voltage

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Removal of phospho-head groups of membrane lipids immobilizes voltage sensors of K+ channels

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Molecular dynamics simulations of asymmetric NaCl and KCl solutions separated by phosphatidylcholine bilayers: potential drops and structural changes induced by strong Na+-lipid interactions and finite size effects

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Binding of anionic lipids to at least three nonannular sites on the potassium channel KcsA is required for channel opening

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Atomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Closing in on the resting state of the Shaker K(+) channel.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Clustal W and Clustal X version 2.0

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Dynamics of the Kv1.2 voltage-gated K+ channel in a membrane environment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

The last few frames of the voltage-gating movie

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Two atomic constraints unambiguously position the S4 segment relative to S1 and S2 segments in the closed state of Shaker K channel

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Partitioning of amino acid side chains into lipid bilayers: results from computer simulations and comparison to experiment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

On the thermodynamic stability of a charged arginine side chain in a transmembrane helix

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Dissecting the coupling between the voltage sensor and pore domains

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Environment of the gating charges in the Kv1.2 Shaker potassium channel

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Interface connections of a transmembrane voltage sensor

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Potassium channels: complete and undistorted

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Crystal structure of a mammalian voltage-dependent Shaker family K+ channel

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

S3b amino acid residues do not shuttle across the bilayer in voltage-dependent Shaker K+ channels

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Molecular architecture of the KvAP voltage-dependent K+ channel in a lipid bilayer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Performance comparison of generalized born and Poisson methods in the calculation of electrostatic solvation energies for protein structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

An Implicit Membrane Generalized Born Theory for the Study of Structure, Stability, and Interactions of Membrane Proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

A quantitative description of membrane current and its application to conduction and excitation in nerve

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Interactions of phospholipids with the potassium channel KcsA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2848128

Atomistic simulations of biologically realistic transmembrane potential gradients.

20 June 2018

1 reference

https://api.crossref.org/works/10.3109%2F09687680903278539

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F09687680903278539

Implicit solvation based on generalized Born theory in different dielectric environments.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F09687680903278539

Generalized born model with a simple smoothing function.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F09687680903278539

How does a voltage sensor interact with a lipid bilayer? Simulations of a potassium channel domain.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F09687680903278539

Focused electric field across the voltage sensor of potassium channels

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F09687680903278539

Potential of mean force and pKa profile calculation for a lipid membrane-exposed arginine side chain

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F09687680903278539

Gating charge displacement in voltage-gated ion channels involves limited transmembrane movement

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F09687680903278539

Gating motions in voltage-gated potassium channels revealed by coarse-grained molecular dynamics simulations

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19883299

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Modeling Membranes under a Transmembrane Potential

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19883299

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3109/09687680903278539

1 reference

15 September 2017

1 reference

15 September 2017

1 reference