Adaptive evolution of proteins secreted during sperm maturation: an analysis of the mouse epididymal transcriptome (Q30435211)

14 October 2017

Adaptive evolution of proteins secreted during sperm maturation: an analysis of the mouse epididymal transcriptome (English)

1 reference

14 October 2017

0 references

0 references

1 reference

3

Michael W Nachman

1 reference

14 October 2017

Matthew D Dean

1

1 reference

PMCID

2915769

14 October 2017

Jeffrey M Good

series ordinal

2

1 reference

14 October 2017

1 December 2007

1 reference

Molecular Biology and Evolution

14 October 2017

1 reference

14 October 2017

25

1 reference

14 October 2017

2

1 reference

14 October 2017

383-392

1 reference

X chromosome inactivation during Drosophila spermatogenesis

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

The rat epididymal transcriptome: comparison of segmental gene expression in the rat and mouse epididymides

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

An ectopic expression screen reveals the protective and toxic effects of Drosophila seminal fluid proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Seminal fluid signaling in the female reproductive tract: lessons from rodents and pigs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

The frequency of multiple paternity suggests that sperm competition is common in house mice (Mus domesticus)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Evolution on the X chromosome: unusual patterns and processes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Evolution of reproductive proteins from animals and plants.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Pervasive adaptive evolution in primate seminal proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Site-to-site variation of synonymous substitution rates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Molecular population genetics of accessory gland protein genes and testis-expressed genes in Drosophila mojavensis and D. arizonae

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Cross-species comparison of Drosophila male accessory gland protein genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

The mouse epididymal transcriptome: transcriptional profiling of segmental gene expression in the epididymis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

A scan for positively selected genes in the genomes of humans and chimpanzees

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Sex peptide causes mating costs in female Drosophila melanogaster

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Not so different after all: a comparison of methods for detecting amino acid sites under selection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Epididymal cell secretory activities and the role of proteins in boar sperm maturation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Rate of molecular evolution of the seminal protein gene SEMG2 correlates with levels of female promiscuity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

HyPhy: hypothesis testing using phylogenies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Antimicrobial actions of the human epididymis 2 (HE2) protein isoforms, HE2alpha, HE2beta1 and HE2beta2

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Improved prediction of signal peptides: SignalP 3.0

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

The functional genomic distribution of protein divergence in two animal phyla: coevolution, genomic conflict, and constraint

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Ontologizing gene-expression microarray data: characterizing clusters with Gene Ontology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Elevated rates of protein secretion, evolution, and disease among tissue-specific genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Rapid sequence divergence in mammalian beta-defensins by adaptive evolution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Sexual antagonism and X inactivation--the SAXI hypothesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Contribution of epididymal secretory proteins for spermatozoa maturation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Antibacterial properties of the sperm-binding proteins and peptides of human epididymis 2 (HE2) family; salt sensitivity, structural dependence and their interaction with outer and cytoplasmic membranes of Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Initial sequencing and comparative analysis of the mouse genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Large-scale analysis of the human and mouse transcriptomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

The rapid evolution of reproductive proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

An abundance of X-linked genes expressed in spermatogonia

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Polymorphism in abalone fertilization proteins is consistent with the neutral evolution of the egg's receptor for lysin (VERL) and positive darwinian selection of sperm lysin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Galactosyltransferase function during mammalian fertilization

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Molecular population genetics of male accessory gland proteins in Drosophila

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Promiscuity and the primate immune system

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Gene ontology: tool for the unification of biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Codon-substitution models for heterogeneous selection pressure at amino acid sites

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Rapid evolution of male reproductive genes in the descent of man.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Role of luminal fluid glycosyltransferases and glycosidases in the modification of rat sperm plasma membrane glycoproteins during epididymal maturation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Plasma membrane structure and remodelling during sperm maturation in the epididymis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Positive selection drives the evolution of the Acp29AB accessory gland protein in Drosophila.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

PAML: a program package for phylogenetic analysis by maximum likelihood

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Tokens of love: functions and regulation of Drosophila male accessory gland products

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Glycosylation of rat sperm plasma membrane during epididymal maturation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

A codon-based model of nucleotide substitution for protein-coding DNA sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Positive selection is a general phenomenon in the evolution of abalone sperm lysin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Sperm surface changes during epididymal maturation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Changes in plasma membrane glycoproteins of rat spermatozoa during maturation in the epididymis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Differing amounts of genetic polymorphism in testes and male accessory glands of Drosophila melanogaster and Drosophila simulans.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

High level of divergence of male-reproductive-tract proteins, between Drosophila melanogaster and its sibling species, D. simulans.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Protein-carbohydrate complementarity in mammalian gamete recognition

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Membrane remodelling during sperm maturation in the epididymis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Complementarity between sperm surface beta-1,4-galactosyltransferase and egg-coat ZP3 mediates sperm-egg binding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2915769

Primate mating systems and the evolution of immune response

20 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Molecular evolution of seminal proteins in field crickets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

The Acp26Aa seminal fluid protein is a modulator of early egg hatchability in Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

The Relative Rates of Evolution of Sex Chromosomes and Autosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Genomic and functional evolution of the Drosophila melanogaster sperm proteome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Rates of protein evolution are positively correlated with developmental timing of expression during mouse spermatogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Male contributions to egg production: the role of accessory gland products and sperm in Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

The mouse X chromosome is enriched for sex-biased genes not subject to selection by meiotic sex chromosome inactivation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Distribution and site of production of specific proteins in the rat epididymis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Evidence that the human X chromosome is enriched for male-specific but not female-specific genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Positive selection and sequence rearrangements generate extensive polymorphism in the gamete recognition protein bindin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

A global profile of germline gene expression in C. elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Differential expression and antibacterial activity of WFDC10A in the monkey epididymis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Proteomic analysis of sperm regions that mediate sperm-egg interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Sex-specific functional specialization and the evolutionary rates of essential fertility genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Positive selection driving the evolution of a gene of male reproduction, Acp26Aa, of Drosophila: II. Divergence versus polymorphism

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Comparative genomics of accessory gland protein genes in Drosophila melanogaster and D. pseudoobscura.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Secreted epididymal glycoprotein 2D6 that binds to the sperm's plasma membrane is a member of the beta-defensin superfamily of pore-forming glycopeptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSM265

Mammalian sperm proteins are rapidly evolving: evidence of positive selection in functionally diverse genes

21 January 2018

1 reference

12 December 2020

Pervasive adaptive evolution in mammalian fertilization proteins

1 reference

12 December 2020

Sex-linked mammalian sperm proteins evolve faster than autosomal ones

1 reference

12 December 2020

Enhanced adaptive evolution of sperm-expressed genes on the mammalian X chromosome

1 reference

12 December 2020

Genome-wide profiling of segmental-regulated transcriptomes in human epididymis using oligo microarray.

1 reference

12 December 2020

Protein Evolution Is Faster Outside the Cell

1 reference

12 December 2020

SEX CHROMOSOMES AND THE EVOLUTION OF SEXUAL DIMORPHISM.

1 reference

12 December 2020

Immunodissection of sperm surface modifications during epididymal maturation

1 reference

12 December 2020

Changes in the protein composition of rat spermatozoa during maturation in the epididymis

1 reference

12 December 2020

Interaction of proteins of epididymal origin with spermatozoa

1 reference

12 December 2020

Identifiers

DOI

10.1093/MOLBEV/MSM265

1 reference

14 October 2017

1 reference

14 October 2017

1 reference

PMCID

2915769