Glycines: role in α-helical membrane protein structures and a potential indicator of native conformation. (Q30417420)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22650985%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

title

Glycines: role in α-helical membrane protein structures and a potential indicator of native conformation (English)

1 reference

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2 February 2020

1 reference

2

1 reference

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2 February 2020

Huan-Xiang Zhou

series ordinal

3

1 reference

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2 February 2020

author name string

Hao Dong

series ordinal

1

1 reference

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2 February 2020

Timothy A Cross

series ordinal

4

1 reference

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2 February 2020

language of work or name

English

0 references

publication date

7 June 2012

1 reference

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2 February 2020

1 reference

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2 February 2020

volume

51

1 reference

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2 February 2020

issue

24

1 reference

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2 February 2020

page(s)

4779-4789

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22650985%20AND%20SRC:MED&resulttype=core&format=json

In search of a consensus model of the resting state of a voltage-sensing domain

2 February 2020

cites work

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The Cystic Fibrosis Transmembrane Conductance Regulator (CFTR): THREE-DIMENSIONAL STRUCTURE AND LOCALIZATION OF A CHANNEL GATE

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Tolerance to changes in membrane lipid composition as a selected trait of membrane proteins

20 June 2018

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Aggregation of model membrane proteins, modulated by hydrophobic mismatch, membrane curvature, and protein class.

20 June 2018

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Structural topology of phospholamban pentamer in lipid bilayers by a hybrid solution and solid-state NMR method

20 June 2018

1 reference

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Conformational rearrangement of gastric H(+),K(+)-ATPase induced by an acid suppressant

20 June 2018

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Lipid packing drives the segregation of transmembrane helices into disordered lipid domains in model membranes

20 June 2018

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Structure of a Slow CLC Cl − /H + Antiporter from a Cyanobacterium

20 June 2018

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Asymmetric Configurations and N-terminal Rearrangements in Connexin26 Gap Junction Channels

20 June 2018

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Insight into the Mechanism of the Influenza A Proton Channel from a Structure in a Lipid Bilayer

20 June 2018

1 reference

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Solution Structure and Phospholipid Interactions of the Isolated Voltage-Sensor Domain from KvAP

20 June 2018

1 reference

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Structure and Dynamics of the Membrane-Bound Form of Pf1 Coat Protein: Implications of Structural Rearrangement for Virus Assembly

20 June 2018

1 reference

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Influence of solubilizing environments on membrane protein structures

20 June 2018

1 reference

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Structures of membrane proteins

20 June 2018

1 reference

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Membrane domain structures of three classes of histidine kinase receptors by cell-free expression and rapid NMR analysis

20 June 2018

1 reference

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ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

20 June 2018

1 reference

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Pore architecture and ion sites in acid-sensing ion channels and P2X receptors

20 June 2018

1 reference

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Conformational heterogeneity of the M2 proton channel and a structural model for channel activation

20 June 2018

1 reference

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Emerging roles for lipids in shaping membrane-protein function.

20 June 2018

1 reference

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Structural basis for induced formation of the inflammatory mediator prostaglandin E2.

20 June 2018

1 reference

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Association energetics of membrane spanning alpha-helices

20 June 2018

1 reference

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Transmembrane helix uniformity examined by spectral mapping of torsion angles.

20 June 2018

1 reference

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Conformational thermostabilization of the beta1-adrenergic receptor in a detergent-resistant form

20 June 2018

1 reference

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Lipid bilayers: an essential environment for the understanding of membrane proteins.

20 June 2018

1 reference

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High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor

20 June 2018

1 reference

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Interactions of lipids with aquaporin-0 and other membrane proteins

20 June 2018

1 reference

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Structure of acid-sensing ion channel 1 at 1.9 A resolution and low pH

20 June 2018

1 reference

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Crystal structure of inhibitor-bound human 5-lipoxygenase-activating protein

20 June 2018

1 reference

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Backbone Structure of the Amantadine-Blocked Trans-Membrane Domain M2 Proton Channel from Influenza A Virus

20 June 2018

1 reference

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X-ray structure of the membrane-bound cytochrome c quinol dehydrogenase NrfH reveals novel haem coordination

20 June 2018

1 reference

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Curvature and hydrophobic forces drive oligomerization and modulate activity of rhodopsin in membranes.

20 June 2018

1 reference

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Quasi-symmetry in the cryo-EM structure of EmrE provides the key to modeling its transmembrane domain

20 June 2018

1 reference

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Three-dimensional structure of the transmembrane domain of Vpu from HIV-1 in aligned phospholipid bicelles

20 June 2018

1 reference

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Comparison of three structures of the multidrug transporter EmrE.

20 June 2018

1 reference

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Structure of the multidrug transporter EmrD from Escherichia coli

20 June 2018

1 reference

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Lipid-protein interactions in double-layered two-dimensional AQP0 crystals

20 June 2018

1 reference

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Membranes are more mosaic than fluid

20 June 2018

1 reference

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Structure of the KvAP voltage-dependent K+ channel and its dependence on the lipid membrane

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

Transmembrane glycine zippers: physiological and pathological roles in membrane proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

A C alpha-H...O hydrogen bond in a membrane protein is not stabilizing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

X-ray structure of a voltage-dependent K+ channel

20 June 2018

1 reference

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Gating the selectivity filter in ClC chloride channels

20 June 2018

1 reference

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Uniformity, ideality, and hydrogen bonds in transmembrane alpha-helices

20 June 2018

1 reference

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Comparison of helix interactions in membrane and soluble alpha-bundle proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

A protein sequence that can encode native structure by disfavoring alternate conformations

20 June 2018

1 reference

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Micelle-induced curvature in a water-insoluble HIV-1 Env peptide revealed by NMR dipolar coupling measurement in stretched polyacrylamide gel.

20 June 2018

1 reference

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The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions

20 June 2018

1 reference

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The formation and dynamics of proton wires in channel environments

20 June 2018

1 reference

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Helical membrane protein folding, stability, and evolution

20 June 2018

1 reference

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The GxxxG motif: a framework for transmembrane helix-helix association

20 June 2018

1 reference

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Helix packing in polytopic membrane proteins: role of glycine in transmembrane helix association

20 June 2018

1 reference

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Water: foldase activity in catalyzing polypeptide conformational rearrangements

20 June 2018

1 reference

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Lipid composition and the lateral pressure profile in bilayers

20 June 2018

1 reference

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The structure of bacteriorhodopsin at 3.0 A resolution based on electron crystallography: implication of the charge distribution

20 June 2018

1 reference

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A helix propensity scale based on experimental studies of peptides and proteins

20 June 2018

1 reference

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Influence of lipid/peptide hydrophobic mismatch on the thickness of diacylphosphatidylcholine bilayers. A 2H NMR and ESR study using designed transmembrane alpha-helical peptides and gramicidin A.

20 June 2018

1 reference

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The Structure of the Potassium Channel: Molecular Basis of K+ Conduction and Selectivity

20 June 2018

1 reference

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High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived orientational constraints

20 June 2018

1 reference

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A transmembrane helix dimer: structure and implications

20 June 2018

1 reference

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Lipidic cubic phases: a novel concept for the crystallization of membrane proteins

20 June 2018

1 reference

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Structure and dynamics of a proton wire: a theoretical study of H+ translocation along the single-file water chain in the gramicidin A channel

20 June 2018

1 reference

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Electron-crystallographic refinement of the structure of bacteriorhodopsin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

Principles that govern the folding of protein chains

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

The Conformation of Bacteriorhodopsin Loops in Purple Membranes Resolved by Solid-State MAS NMR Spectroscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

Coarse-grained molecular dynamics simulations of the energetics of helix insertion into a lipid bilayer.

26 November 2018

1 reference

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Cross- and axial-peak intensities in 2D-SLF experiments based on cross-polarization--the role of the initial density matrix.

26 November 2018

1 reference

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Conformational dynamics of M2 helices in KirBac channels: helix flexibility in relation to gating via molecular dynamics simulations.

26 November 2018

1 reference

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Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins

26 November 2018

1 reference

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Membrane insertion of a potassium-channel voltage sensor

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

Conformational energetics of rhodopsin modulated by nonlamellar-forming lipids

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

GXXXG and AXXXA: common alpha-helical interaction motifs in proteins, particularly in extremophiles

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

Putting the beta-breaks on membrane protein misfolding

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

The Affinity of GXXXG Motifs in Transmembrane Helix-Helix Interactions Is Modulated by Long-range Communication

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426646

Intrahelical hydrogen bonding of serine, threonine and cysteine residues within alpha-helices and its relevance to membrane-bound proteins

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22650985

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Side chain contributions to the stability of alpha-helical structure in peptides

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22650985

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Membrane Proteins. The Amino Acid Composition of Membrane-Penetrating Segments

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22650985

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/BI300090X

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22650985%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22650985%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22650985%20AND%20SRC:MED&resulttype=core&format=json