Optimal mutation sites for PRE data collection and membrane protein structure prediction. (Q30401721)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21481772%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

title

Optimal mutation sites for PRE data collection and membrane protein structure prediction (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21481772%20AND%20SRC:MED&resulttype=core&format=json

protein structure prediction

28 January 2020

main subject

0 references

1 reference

1 reference

6

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28 January 2020

John H Bushweller

7

1 reference

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28 January 2020

author name string

Huiling Chen

1

1 reference

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28 January 2020

Fei Ji

2

1 reference

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28 January 2020

Victor Olman

3

1 reference

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28 January 2020

Charles K Mobley

4

1 reference

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28 January 2020

Yizhou Liu

5

1 reference

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28 January 2020

James H Prestegard

8

1 reference

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28 January 2020

Ying Xu

9

1 reference

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28 January 2020

publication date

1 April 2011

1 reference

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28 January 2020

1 reference

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28 January 2020

volume

19

1 reference

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28 January 2020

issue

4

1 reference

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28 January 2020

page(s)

484-495

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21481772%20AND%20SRC:MED&resulttype=core&format=json

Structure-independent analysis of the breadth of the positional distribution of disordered groups in macromolecules from order parameters for long, variable-length vectors using NMR paramagnetic relaxation enhancement

28 January 2020

cites work

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How significant is a protein structure similarity with TM-score = 0.5?

20 June 2018

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20 June 2018

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Mapping the human membrane proteome: a majority of the human membrane proteins can be classified according to function and evolutionary origin

20 June 2018

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Solution Nuclear Magnetic Resonance Structure of Membrane-Integral Diacylglycerol Kinase

20 June 2018

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Prediction of membrane protein structures with complex topologies using limited constraints

20 June 2018

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Barcodes for genomes and applications

20 June 2018

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NMR solution structure of the integral membrane enzyme DsbB: functional insights into DsbB-catalyzed disulfide bond formation

20 June 2018

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Structure of KCNE1 and Implications for How It Modulates the KCNQ1 Potassium Channel † ‡

20 June 2018

1 reference

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Structure and mechanism of the M2 proton channel of influenza A virus

20 June 2018

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Amantadine-induced conformational and dynamical changes of the influenza M2 transmembrane proton channel.

20 June 2018

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20 June 2018

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Elucidating transient macromolecular interactions using paramagnetic relaxation enhancement

20 June 2018

1 reference

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Toward high-resolution prediction and design of transmembrane helical protein structures

20 June 2018

1 reference

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M-TASSER: an algorithm for protein quaternary structure prediction

20 June 2018

1 reference

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Purification and initiation of structural characterization of human peripheral myelin protein 22, an integral membrane protein linked to peripheral neuropathies

20 June 2018

1 reference

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Spectroscopic validation of the pentameric structure of phospholamban

20 June 2018

1 reference

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Helix-packing motifs in membrane proteins

20 June 2018

1 reference

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Progress in structure prediction of alpha-helical membrane proteins.

20 June 2018

1 reference

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Predicting the solvent accessibility of transmembrane residues from protein sequence

20 June 2018

1 reference

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Site-directed parallel spin-labeling and paramagnetic relaxation enhancement in structure determination of membrane proteins by solution NMR spectroscopy.

20 June 2018

1 reference

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OPM: orientations of proteins in membranes database

20 June 2018

1 reference

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Solving the membrane protein folding problem

20 June 2018

1 reference

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Progress in modeling of protein structures and interactions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3099474

The Amber biomolecular simulation programs

20 June 2018

1 reference

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NMR spectroscopy of paramagnetic metalloproteins

20 June 2018

1 reference

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The structure of phospholamban pentamer reveals a channel-like architecture in membranes

20 June 2018

1 reference

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TM-align: a protein structure alignment algorithm based on the TM-score

20 June 2018

1 reference

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Scoring function for automated assessment of protein structure template quality

20 June 2018

1 reference

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A pedestrian guide to membrane protein crystallization

20 June 2018

1 reference

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2D solid state NMR spectral simulation of 3(10), alpha, and pi-helices.

20 June 2018

1 reference

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Automated structure prediction of weakly homologous proteins on a genomic scale

20 June 2018

1 reference

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SPICKER: a clustering approach to identify near-native protein folds

20 June 2018

1 reference

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The evolution of transmembrane helix kinks and the structural diversity of G protein-coupled receptors

20 June 2018

1 reference

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Structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside

20 June 2018

1 reference

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Dipolar waves map the structure and topology of helices in membrane proteins.

20 June 2018

1 reference

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The closed state of a H+ channel helical bundle combining precise orientational and distance restraints from solid state NMR

20 June 2018

1 reference

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Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3099474

Structure and function of bacterial outer membrane proteins: barrels in a nutshell

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3099474

Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3099474

A solid-state NMR index of helical membrane protein structure and topology.

20 June 2018

1 reference

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20 June 2018

The Protein Data Bank

1 reference

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Topology prediction for helical transmembrane proteins at 86% accuracy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3099474

Site-specific incorporation of biophysical probes into proteins

20 June 2018

1 reference

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Four helix bundle diversity in globular proteins

20 June 2018

1 reference

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3099474

Crystal structure of the DsbB-DsbA complex reveals a mechanism of disulfide bond generation.

20 June 2018

1 reference

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NMR structure of Mistic, a membrane-integrating protein for membrane protein expression.

26 November 2018

1 reference

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Stochastic proximity embedding.

26 November 2018

1 reference

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Structural fitting of PISEMA spectra of aligned proteins

26 November 2018

1 reference

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Membrane protein folding and oligomerization: the two-stage model

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21481772

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.STR.2011.02.002

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21481772%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21481772%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

1 reference