MMM: a sequence-to-structure alignment protocol. (Q30356421)

20 June 2017

title

MMM: a sequence-to-structure alignment protocol. (English)

1 reference

20 June 2017

1 reference

Brajesh K Rai

1

1 reference

20 June 2017

Carlos J Madrid-Aliste

series ordinal

2

1 reference

20 June 2017

J Eduardo Fajardo

series ordinal

3

1 reference

20 June 2017

András Fiser

series ordinal

4

1 reference

20 June 2017

language of work or name

English

0 references

publication date

23 August 2006

1 reference

20 June 2017

1 reference

20 June 2017

volume

22

1 reference

20 June 2017

issue

21

1 reference

20 June 2017

page(s)

2691-2692

1 reference

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

20 June 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

ESyPred3D: Prediction of proteins 3D structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

Tolerating some redundancy significantly speeds up clustering of large protein databases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

Variable gap penalty for protein sequence-structure alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

T-Coffee: A novel method for fast and accurate multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

Rapid and sensitive sequence comparison with FASTP and FASTA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

Consensus alignment for reliable framework prediction in homology modeling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

Multiple mapping method: a novel approach to the sequence-to-structure alignment problem in comparative protein structure modeling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

A 3D-1D substitution matrix for protein fold recognition that includes predicted secondary structure of the sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

Comparative protein modelling by satisfaction of spatial restraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL449

10.1093/BIOINFORMATICS/BTL449

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/RaiMFF06

20 June 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference