The advancement of chemical cross-linking and mass spectrometry for structural proteomics: from single proteins to protein interaction networks (Q30317072)

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English	The advancement of chemical cross-linking and mass spectrometry for structural proteomics: from single proteins to protein interaction networks	scientific article

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scholarly article

1 reference

Europe PubMed Central

17 June 2017

1 reference

Europe PubMed Central

The advancement of chemical cross-linking and mass spectrometry for structural proteomics: from single proteins to protein interaction networks (English)

1 reference

Europe PubMed Central

17 June 2017

1

0 references

publication date

16 September 2014

1 reference

Europe PubMed Central

17 June 2017

Expert Review of Proteomics

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Europe PubMed Central

17 June 2017

11

1 reference

Europe PubMed Central

17 June 2017

6

1 reference

Europe PubMed Central

17 June 2017

733-743

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Europe PubMed Central

17 June 2017

High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Chemical cross-linking with thiol-cleavable reagents combined with differential mass spectrometric peptide mapping--a novel approach to assess intermolecular protein contacts

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

A generic strategy to analyze the spatial organization of multi-protein complexes by cross-linking and mass spectrometry.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Mapping protein interfaces with a fluorogenic cross-linker and mass spectrometry: application to nebulin-calmodulin complexes

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Dynamic protein ligand interactions--insights from MS.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Mass spectrometry methods for studying structure and dynamics of biological macromolecules

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https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Chemical cross-linkers for protein structure studies by mass spectrometry

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https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Mass spectrometry supported determination of protein complex structure

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Evaluating protein interactions through cross-linking mass spectrometry

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https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

In vivo protein complex topologies: sights through a cross-linking lens

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Mass spectrometry-based structural proteomics

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

The beginning of a beautiful friendship: cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Isotope-tagged cross-linking reagents. A new tool in mass spectrometric protein interaction analysis

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Intramolecular cross-linking experiments on cytochrome c and ribonuclease A using an isotope multiplet method.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

A new crosslinker for mass spectrometric analysis of the quaternary structure of protein complexes

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Optimizing the enrichment of cross-linked products for mass spectrometric protein analysis

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Expanding the chemical cross-linking toolbox by the use of multiple proteases and enrichment by size exclusion chromatography

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

A modular cross-linking approach for exploring protein interactions

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

A top down approach to protein structural studies using chemical cross-linking and Fourier transform mass spectrometry.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

A top-down approach to protein structure studies using chemical cross-linking and Fourier transform mass spectrometry.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Subunit order of eukaryotic TRiC/CCT chaperonin by cross-linking, mass spectrometry, and combinatorial homology modeling

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

The molecular architecture of the eukaryotic chaperonin TRiC/CCT

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Phycobilisomes supply excitations to both photosystems in a megacomplex in cyanobacteria

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

MS-based cross-linking analysis reveals the location of the PsbQ protein in cyanobacterial photosystem II.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

De novo high-resolution protein structure determination from sparse spin-labeling EPR data.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Cross-link guided molecular modeling with ROSETTA

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Pyruvate formate-lyase interacts directly with the formate channel FocA to regulate formate translocation

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Architecture of the large subunit of the mammalian mitochondrial ribosome

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Comparative cross-linking and mass spectrometry of an intact F-type ATPase suggest a role for phosphorylation.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Structural insights into the calmodulin-Munc13 interaction obtained by cross-linking and mass spectrometry

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Quantitative evaluation of the lengths of homobifunctional protein cross-linking reagents used as molecular rulers

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Chances and pitfalls of chemical cross-linking with amine-reactive N-hydroxysuccinimide esters

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Chemical cross-linking with NHS esters: a systematic study on amino acid reactivities

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Analysis of amyloid nanostructures using photo-cross-linking: in situ comparison of three widely used photo-cross-linkers

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Database search algorithm for identification of intact cross-links in proteins and peptides using tandem mass spectrometry.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Lysine-specific chemical cross-linking of protein complexes and identification of cross-linking sites using LC-MS/MS and the xQuest/xProphet software pipeline

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

CrossWork: software-assisted identification of cross-linked peptides.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

xComb: a cross-linked peptide database approach to protein-protein interaction analysis

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

StavroX--a software for analyzing crosslinked products in protein interaction studies

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Bioinformatics tools for the structural elucidation of multi-subunit protein complexes by mass spectrometric analysis of protein-protein cross-links

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Reliable identification of cross-linked products in protein interaction studies by 13C-labeled p-benzoylphenylalanine

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Tandem mass spectrometry acquisition approaches to enhance identification of protein-protein interactions using low-energy collision-induced dissociative chemical crosslinking reagents

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Cleavable cross-linker for protein structure analysis: reliable identification of cross-linking products by tandem MS.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Ionic reagent for controlling the gas-phase fragmentation reactions of cross-linked peptides.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Developing new isotope-coded mass spectrometry-cleavable cross-linkers for elucidating protein structures.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

A new cross-linking strategy: protein interaction reporter (PIR) technology for protein-protein interaction studies

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

In vivo protein interaction network identified with a novel real-time cross-linked peptide identification strategy

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Protein interactions, post-translational modifications and topologies in human cells

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

A gas phase cleavage reaction of cross-linked peptides for protein complex topology studies by peptide fragment fingerprinting from large sequence database.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

A chemical toolkit for proteins--an expanded genetic code

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Efficient incorporation of unnatural amino acids into proteins in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Probing the conformation of the ISWI ATPase domain with genetically encoded photoreactive crosslinkers and mass spectrometry

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Monitoring conformational changes in peroxisome proliferator-activated receptor α by a genetically encoded photoamino acid, cross-linking, and mass spectrometry

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

An in vivo photo-cross-linking approach reveals a homodimerization domain of Aha1 in S. cerevisiae

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Photo-leucine and photo-methionine allow identification of protein-protein interactions in living cells

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

An isotopically coded CID-cleavable biotinylated cross-linker for structural proteomics

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides.

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Characterization of an Antagonist Interleukin-6 Dimer by Stable Isotope Labeling, Cross-linking, and Mass Spectrometry

1 reference

https://api.crossref.org/works/10.1586%2F14789450.2014.960852

21 January 2018

Identifiers

10.1586/14789450.2014.960852

1 reference

Europe PubMed Central

17 June 2017

1 reference

Europe PubMed Central

17 June 2017

ResearchGate publication ID

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