MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data (Q30000953)

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16 January 2020

title

MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data (English)

1 reference

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16 January 2020

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1

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16 January 2020

Matthias Hirsch-Hoffmann

2

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16 January 2020

Katja Baerenfaller

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16 January 2020

Wilhelm Gruissem

4

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16 January 2020

Sacha Baginsky

5

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16 January 2020

Volker Egelhofer

10

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Stefanie Wienkoop

11

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Norbert Rolland

14

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16 January 2020

Hirofumi Nakagami

16

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16 January 2020

Alexandra M Jones

17

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Sandra Tanz

20

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16 January 2020

A. Harvey Millar

21

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16 January 2020

Joshua L. Heazlewood

22

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16 January 2020

12

Wolfram Weckwerth

1 reference

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16 January 2020

7

Waltraud X Schulze

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16 January 2020

author name string

Robert Schmidt

6

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16 January 2020

Qi Sun

8

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16 January 2020

Klaas J van Wijk

9

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16 January 2020

Christophe Bruley

13

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16 January 2020

Tetsuro Toyoda

15

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16 January 2020

Steven P Briggs

18

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16 January 2020

Ian Castleden

19

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16 January 2020

language of work or name

English

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publication date

12 November 2010

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16 January 2020

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16 January 2020

volume

155

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16 January 2020

page(s)

259-270

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16 January 2020

issue

1

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Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research

16 January 2020

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3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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Discovery and revision of Arabidopsis genes by proteogenomics

3 June 2018

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Purification of low-abundance Arabidopsis plasma-membrane protein complexes and identification of candidate components

3 June 2018

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3 June 2018

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PPDB, the Plant Proteomics Database at Cornell

3 June 2018

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PhosCalc: a tool for evaluating the sites of peptide phosphorylation from mass spectrometer data

3 June 2018

1 reference

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Identification of novel proteins and phosphorylation sites in a tonoplast enriched membrane fraction of Arabidopsis thaliana.

3 June 2018

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If the antibody fails--a mass western approach

3 June 2018

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Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.

3 June 2018

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Integration of metabolomic and proteomic phenotypes: analysis of data covariance dissects starch and RFO metabolism from low and high temperature compensation response in Arabidopsis thaliana

3 June 2018

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Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring

3 June 2018

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The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

3 June 2018

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An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets

3 June 2018

1 reference

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Quantitative phosphoproteomic analysis of plasma membrane proteins reveals regulatory mechanisms of plant innate immune responses

3 June 2018

1 reference

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MaizeGDB's new data types, resources and activities

3 June 2018

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The TIGR Rice Genome Annotation Resource: improvements and new features

3 June 2018

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3 June 2018

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Mapping the Arabidopsis organelle proteome

3 June 2018

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Decoding Ca(2+) signals through plant protein kinases

3 June 2018

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Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database

3 June 2018

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3 June 2018

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PlantsP: a functional genomics database for plant phosphorylation

3 June 2018

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Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.

3 June 2018

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Comparative analysis of phytohormone-responsive phosphoproteins in Arabidopsis thaliana using TiO2-phosphopeptide enrichment and mass accuracy precursor alignment

26 November 2018

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Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.

26 November 2018

1 reference

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An efficient organic solvent based extraction method for the proteomic analysis of Arabidopsis plasma membranes

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Phosphoproteomic analysis of ethylene-regulated protein phosphorylation in etiolated seedlings of Arabidopsis mutant ein2 using two-dimensional separations coupled with a hybrid quadrupole time-of-flight mass spectrometer.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

The MultinationalArabidopsisSteering Subcommittee for Proteomics Assembles the Largest Proteome Database Resource for Plant Systems Biology

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

BSKs mediate signal transduction from the receptor kinase BRI1 in Arabidopsis

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

A High Content in Lipid-modified Peripheral Proteins and Integral Receptor Kinases Features in theArabidopsisPlasma Membrane Proteome

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Quantitative Phosphoproteomics of Early Elicitor Signaling inArabidopsis

26 November 2018

1 reference

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Computational prediction of proteotypic peptides for quantitative proteomics.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

A Quantitative Analysis ofArabidopsisPlasma Membrane Using Trypsin-catalyzed18O Labeling

26 November 2018

1 reference

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Relative and absolute quantitative shotgun proteomics: targeting low-abundance proteins in Arabidopsis thaliana.

26 November 2018

1 reference

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Arabidopsis cell wall proteome defined using multidimensional protein identification technology.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Arabidopsis plasma membrane proteomics identifies components of transport, signal transduction and membrane trafficking.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

BRL1, a leucine-rich repeat receptor-like protein kinase, is functionally redundant with BRI1 in regulating Arabidopsis brassinosteroid signaling.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Proteomic Analysis of Glycosylphosphatidylinositol-anchored Membrane Proteins

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

Large-scale Analysis ofin VivoPhosphorylated Membrane Proteins by Immobilized Metal Ion Affinity Chromatography and Mass Spectrometry

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075751

26 November 2018

1 reference

12 December 2020

Novel subsets of the Arabidopsis plasmalemma phosphoproteome identify phosphorylation sites in secondary active transporters

1 reference

PubMed

12 December 2020

Novel Glyoxysomal Protein Kinase, GPK1, Identified by Proteomic Analysis of Glyoxysomes in Etiolated Cotyledons of Arabidopsis thaliana

1 reference

PubMed

12 December 2020

Temporal Analysis of Sucrose-induced Phosphorylation Changes in Plasma Membrane Proteins ofArabidopsis

1 reference

PubMed

12 December 2020

Identifiers

DOI

10.1104/PP.110.168195

2 references

Consolidated OpenCitations Corpus – April 2017

2351988

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21075962%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

2351988

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

0 references

2 references

2351988