Homodimer of p50 (NF kappa B1) does not introduce a substantial directed bend into DNA according to three different experimental assays (Q28776502)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7885838%20AND%20SRC:MED&resulttype=core&format=json

27 October 2019

title

Homodimer of p50 (NF kappa B1) does not introduce a substantial directed bend into DNA according to three different experimental assays (English)

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27 October 2019

1

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27 October 2019

author name string

N R Rice

series ordinal

2

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27 October 2019

S A Nedospasov

series ordinal

3

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27 October 2019

language of work or name

English

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publication date

1 February 1995

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27 October 2019

published in

Nucleic Acids Research

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27 October 2019

volume

23

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27 October 2019

issue

3

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27 October 2019

page(s)

427-433

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Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain

27 October 2019

cites work

1 reference

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Co-crystal structure of TBP recognizing the minor groove of a TATA element

16 March 2017

1 reference

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Crystal structure of a yeast TBP/TATA-box complex

16 March 2017

1 reference

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Crystal structure of a five-finger GLI-DNA complex: new perspectives on zinc fingers

16 March 2017

1 reference

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The X-ray structure of the GCN4-bZIP bound to ATF/CREB site DNA shows the complex depends on DNA flexibility

16 March 2017

1 reference

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Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA

16 March 2017

1 reference

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Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees

16 March 2017

1 reference

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The orientation and spacing of core DNA-binding motifs dictate selective transcriptional responses to three nuclear receptors

16 March 2017

1 reference

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The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex

16 March 2017

1 reference

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Opposite orientations of DNA bending by c-Myc and Max

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Function and activation of NF-kappa B in the immune system

16 March 2017

1 reference

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Transcriptional activation: a complex puzzle with few easy pieces

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Cloning of the p50 DNA binding subunit of NF-kappa B: homology to rel and dorsal

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

The DNA binding subunit of NF-kappa B is identical to factor KBF1 and homologous to the rel oncogene product

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Bending of DNA by transcription factors

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

NF-kappa B and Rel: participants in a multiform transcriptional regulatory system.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

DNA bending by retinoid X receptor-containing retinoid and thyroid hormone receptor complexes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Selective DNA bending by a variety of bZIP proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

In vivo control of NF-kappa B activation by I kappa B alpha.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Architectural transcription factors

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Detection of localized DNA flexibility

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

The locus of sequence-directed and protein-induced DNA bending

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

DNA bending at adenine . thymine tracts

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Complete murine cDNA sequence, genomic structure, and tissue expression of the high mobility group protein HMG-I(Y).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Alteration of a single nucleotide allows efficient binding of H2TF1/KBF1 to the immunoglobulin kappa enhancer B motif

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Modulation of the stability of a gene-regulatory protein dimer by DNA and cAMP.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Functionally distinct NF-kappa B binding sites in the immunoglobulin kappa and IL-2 receptor alpha chain genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Determination of the extent of DNA bending by an adenine-thymine tract

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Molecular characterization of the GCN4-DNA complex

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

The NF-kappa B transcription factor induces DNA bending which is modulated by its 65-kD subunit

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

DNA bending induced by Cro protein binding as demonstrated by gel electrophoresis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

The RepA repressor can act as a transcriptional activator by inducing DNA bends

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Helical repeat and chirality effects on DNA gel electrophoretic mobility

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Fos-Jun heterodimers and Jun homodimers bend DNA in opposite orientations: implications for transcription factor cooperativity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

The role of the p50 and p65 subunits of NF-kappa B in the recognition of cognate sequences

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

The HMG domain of lymphoid enhancer factor 1 bends DNA and facilitates assembly of functional nucleoprotein structures

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Distinct combinations of NF-kappa B subunits determine the specificity of transcriptional activation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

DNA bending, flexibility, and helical repeat by cyclization kinetics.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

The high mobility group protein HMG I(Y) is required for NF-kappa B-dependent virus induction of the human IFN-beta gene

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Protein-induced bending and DNA cyclization

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

The DNA binding domain and bending angle of E. coli CAP protein.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306693

Bending and flexibility of kinetoplast DNA

20 June 2018

1 reference

12 December 2020

DNA bend direction by phase sensitive detection

1 reference

12 December 2020

Bending of DNA by gene-regulatory proteins: construction and use of a DNA bending vector

1 reference

12 December 2020

DNA bending by Fos and Jun: the flexible hinge model

1 reference

12 December 2020

[Interaction of transcription factors of the NF-kappa B/rel family with DNA leads to significant bending of it at binding segments]

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/23.3.427

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7885838%20AND%20SRC:MED&resulttype=core&format=json

27 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7885838%20AND%20SRC:MED&resulttype=core&format=json

27 October 2019

PubMed publication ID

7885838

1 reference