Primate TNF promoters reveal markers of phylogeny and evolution of innate immunity (Q28757475)

1

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

Filipa Ligeiro

5

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

Claudia Brieva

7

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

Pascal Gagneux

8

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

Anne E Goldfeld

11

0 references

Alan R. Mootnick

2

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

James V. Falvo

3

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

Alla V. Tsytsykova

4

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

Ousmane M. Diop

6

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

Stephen J. O'Brien

9

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

Oliver A. Ryder

10

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

language of work or name

English

0 references

publication date

18 July 2007

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https://api.crossref.org/works/10.1371/journal.pone.0000621

full work available at URL

https://dx.plos.org/10.1371/journal.pone.0000621

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https://api.crossref.org/works/10.1371/journal.pone.0000621

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

volume

2

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https://api.crossref.org/works/10.1371/journal.pone.0000621

issue

7

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https://api.crossref.org/works/10.1371/journal.pone.0000621

page(s)

e621

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https://api.crossref.org/works/10.1371/journal.pone.0000621

copyright license

Creative Commons Attribution 4.0 International

start time

18 July 2007

2 references

April 2022 Public Data File from Crossref

https://api.crossref.org/works/10.1371/journal.pone.0000621

1 reference

https://api.crossref.org/works/10.1371/journal.pone.0000621

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Could single-nucleotide polymorphisms (SNPs) affecting the tumour necrosis factor promoter be considered as part of rheumatoid arthritis evolution?

20 June 2018

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Is there a future for TNF promoter polymorphisms?

20 June 2018

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20 June 2018

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Chromosomal phylogeny and evolution of gibbons (Hylobatidae)

20 June 2018

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Inheritable variable sizes of DNA stretches in the human MHC: conserved extended haplotypes and their fragments or blocks

20 June 2018

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Comparative analysis of gene-expression patterns in human and African great ape cultured fibroblasts

20 June 2018

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Timing the origin of New World monkeys

20 June 2018

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20 June 2018

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20 June 2018

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Phylogenetic shadowing of primate sequences to find functional regions of the human genome

20 June 2018

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Compositional evolution of noncoding DNA in the human and chimpanzee genomes

20 June 2018

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Regulation of tumor necrosis factor alpha gene expression by mycobacteria involves the assembly of a unique enhanceosome dependent on the coactivator proteins CBP/p300.

20 June 2018

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Biological and biomedical implications of the co-evolution of pathogens and their hosts

20 June 2018

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Inducer-specific enhanceosome formation controls tumor necrosis factor alpha gene expression in T lymphocytes

20 June 2018

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Direct evidence for the Homo-Pan clade

20 June 2018

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20 June 2018

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Tumour necrosis factor 5' promoter single nucleotide polymorphisms influence susceptibility to rheumatoid arthritis (RA) in immunogenetically defined multiplex RA families

20 June 2018

1 reference

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Genetic differences between humans and great apes

20 June 2018

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mtDNA sequence diversity of orangutans from the islands of Borneo and Sumatra

20 June 2018

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A lipopolysaccharide-specific enhancer complex involving Ets, Elk-1, Sp1, and CREB binding protein and p300 is recruited to the tumor necrosis factor alpha promoter in vivo

20 June 2018

1 reference

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Identification of phylogenetic footprints in primate tumor necrosis factor-alpha promoters.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Evolution of human and non-human primate CC chemokine receptor 5 gene and mRNA. Potential roles for haplotype and mRNA diversity, differential haplotype-specific transcriptional activity, and altered transcription factor binding to polymorphic nucle

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Polymorphism of the human TNF-alpha promoter--random variation or functional diversity?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Stimulus-specific assembly of enhancer complexes on the tumor necrosis factor alpha gene promoter

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Determination of ancestral alleles for human single-nucleotide polymorphisms using high-density oligonucleotide arrays

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Identification of three new single nucleotide polymorphisms in the human tumor necrosis factor-alpha gene promoter

20 June 2018

1 reference

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Polymorphism of the 5'-flanking region of the human tumor necrosis factor (TNF)-alpha gene in Japanese

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Involvement of Bruton's tyrosine kinase in FcepsilonRI-dependent mast cell degranulation and cytokine production

20 June 2018

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Molecular phylogeny of the hominoids: inferences from multiple independent DNA sequence data sets

20 June 2018

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Genomic differentiation among natural populations of orang-utan (Pongo pygmaeus).

20 June 2018

1 reference

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The mitochondrial DNA molecule of Sumatran orangutan and a molecular proposal for two (Bornean and Sumatran) species of orangutan

20 June 2018

1 reference

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Cell-type-specific regulation of the human tumor necrosis factor alpha gene in B cells and T cells by NFATp and ATF-2/JUN.

20 June 2018

1 reference

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Tumor necrosis factor alpha gene regulation in activated T cells involves ATF-2/Jun and NFATp

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

An allelic polymorphism within the human tumor necrosis factor alpha promoter region is strongly associated with HLA A1, B8, and DR3 alleles

20 June 2018

1 reference

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Identification of a novel cyclosporin-sensitive element in the human tumor necrosis factor alpha gene promoter

20 June 2018

1 reference

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A polymorphic variation in a putative regulation box of the TNFA promoter region.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Genetic variability in the TNF-alpha promoter is not associated with type II diabetes mellitus (NIDDM).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints.

20 June 2018

1 reference

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Nucleotide diversity of the TNF gene region in an African village

20 June 2018

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Post-genomics and the neutral theory: variation and conservation in the tumor necrosis factor-alpha promoter

21 January 2018

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Complementary DNA (cDNA) sequence of baboon tumor necrosis factor alpha.

21 January 2018

1 reference

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Molecular cloning, characterization, and quantification of squirrel monkey ( Saimiri sciureus) Th1 and Th2 cytokines.

21 January 2018

1 reference

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Identification, cloning, and sequencing of different cytokine genes in four species of owl monkey.

21 January 2018

1 reference

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Sequencing and analysis of genomic DNA and cDNA encoding TNF-alpha in the squirrel monkey (Saimiri sciureus).

21 January 2018

1 reference

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Catarrhine phylogeny: noncoding DNA evidence for a diphyletic origin of the mangabeys and for a human-chimpanzee clade

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

Human and ape molecular clocks and constraints on paleontological hypotheses

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

Genetic sequences and transcriptional regulation of the TNFA promoter: comparison of human and baboon

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

Asian Primate Classification

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

A New Generic Name for the Hoolock Gibbon (Hylobatidae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

Molecular phylogeny of the major hylobatid divisions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

A complete species-level phylogeny of the Hylobatidae based on mitochondrial ND3-ND4 gene sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

Complex haplotypic structure of the central MHC region flanking TNF in a West African population

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

A primate genome project deserves high priority.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

Single base polymorphism in the human tumour necrosis factor alpha (TNF alpha) gene detectable by NcoI restriction of PCR product

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

Primates in Peril: The World's 25 Most Endangered Primates, 2004–2006

21 January 2018

1 reference

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The ?1030/?862-linked TNF promoter single-nucleotide polymorphisms are associated with the inability to control HIV-1 viremia

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

Positive Selection on a Human-Specific Transcription Factor Binding Site Regulating IL4 Expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000621

On the time scale of New World primate diversification.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

A new TNFA promoter allele identified in South American Blacks.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Comparative sequence analysis of cytokine genes from human and nonhuman primates.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1905939

Genetic divergence of orangutan subspecies (Pongo pygmaeus)

27 November 2018

1 reference

12 December 2020

Influence of TNFα gene polymorphisms on TNFα production and disease

1 reference

12 December 2020

TNF-alpha promoter single nucleotide polymorphisms are markers of human ancestry

1 reference

12 December 2020

Novel polymorphisms and the definition of promoter 'alleles' of the tumor necrosis factor and lymphotoxin alpha loci: inclusion in HLA haplotypes

1 reference

12 December 2020

Extended major histocompatibility complex haplotypes in man: role of alleles analogous to murine t mutants

1 reference

12 December 2020

Post-induction, stimulus-specific regulation of tumor necrosis factor mRNA expression

1 reference

12 December 2020

Detection of a C-insertion polymorphism within the human tumor necrosis factor alpha (TNFA) gene

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0000621

Identifiers

DOI

1 reference