HIV infection reveals widespread expansion of novel centromeric human endogenous retroviruses (Q28681264)

14

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author name string

Rafael Contreras-Galindo

1

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Mark H Kaplan

2

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Shirley He

3

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Angie C Contreras-Galindo

4

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Marta J Gonzalez-Hernandez

5

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Derek Dube

7

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Susana M Chan

8

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Dan Robinson

9

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Fan Meng

10

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Manhong Dai

11

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Scott D Gitlin

12

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Arul M Chinnaiyan

13

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David M Markovitz

A high-coverage genome sequence from an archaic Denisovan individual

15

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language of work or name

English

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publication date

September 2013

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published in

Genome Research

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volume

23

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issue

9

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page(s)

1505-13

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cites work

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Long-term reinfection of the human genome by endogenous retroviruses

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Identification of human endogenous retroviruses with complex mRNA expression and particle formation

17 March 2017

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Expression of human endogenous retrovirus type K (HML-2) is activated by the Tat protein of HIV-1.

17 March 2017

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Identification, characterization, and comparative genomic distribution of the HERV-K (HML-2) group of human endogenous retroviruses

3 June 2018

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Characterization of human endogenous retroviral elements in the blood of HIV-1-infected individuals

3 June 2018

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Centromeres: unique chromatin structures that drive chromosome segregation

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Recent amplification of the kangaroo endogenous retrovirus, KERV, limited to the centromere

3 June 2018

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Widespread gene conversion in centromere cores

3 June 2018

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Centromeres: the wild west of the post-genomic age.

3 June 2018

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Chromatin dynamics associated with HIV-1 Tat-activated transcription

3 June 2018

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Effects of retroviruses on host genome function.

3 June 2018

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Human endogenous retrovirus K (HML-2) elements in the plasma of people with lymphoma and breast cancer

3 June 2018

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Centromere mitotic recombination in mammalian cells

3 June 2018

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Inactivation of a human kinetochore by specific targeting of chromatin modifiers

3 June 2018

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Detection of HERV-K(HML-2) viral RNA in plasma of HIV type 1-infected individuals

3 June 2018

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Human endogenous retroviral elements as indicators of ectopic recombination events in the primate genome

3 June 2018

1 reference

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Expression of human endogenous retrovirus K in melanomas and melanoma cell lines

3 June 2018

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The role of CENP-B and alpha-satellite DNA: de novo assembly and epigenetic maintenance of human centromeres

3 June 2018

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Tissue specificity of enhancer and promoter activities of a HERV-K(HML-2) LTR.

3 June 2018

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An assessment of the sequence gaps: unfinished business in a finished human genome

3 June 2018

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Human endogenous retrovirus K solo-LTR formation and insertional polymorphisms: implications for human and viral evolution

3 June 2018

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Sequencing of a rice centromere uncovers active genes

3 June 2018

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Genomic organization of the human endogenous retrovirus HERV-K(HML-2.HOM) (ERVK6) on chromosome 7.

3 June 2018

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Transcriptionally active HERV-K genes: identification, isolation, and chromosomal mapping

3 June 2018

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Many human endogenous retrovirus K (HERV-K) proviruses are unique to humans

3 June 2018

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Proviral structure, chromosomal location, and expression of HERV-K-T47D, a novel human endogenous retrovirus derived from T47D particles.

3 June 2018

1 reference

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HERV-K: the biologically most active human endogenous retrovirus family

3 June 2018

1 reference

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Nonrandom localization of recombination events in human alpha satellite repeat unit variants: implications for higher-order structural characteristics within centromeric heterochromatin

3 June 2018

1 reference

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A novel centromeric repetitive DNA from human chromosome 22.

3 June 2018

1 reference

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A non-alphoid repetitive DNA sequence from human chromosome 21

3 June 2018

1 reference

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Transcription and histone modifications in the recombination-free region spanning a rice centromere.

3 June 2018

1 reference

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Expression analyses of human endogenous retroviruses (HERVs): tissue-specific and developmental stage-dependent expression of HERVs

27 November 2018

1 reference

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An endogenous retrovirus derived from human melanoma cells.

27 November 2018

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Monocyte activation and differentiation augment human endogenous retrovirus expression: implications for inflammatory brain diseases

27 November 2018

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Molecular cloning and phylogenetic analysis of the human endogenous retrovirus HERV-K long terminal repeat elements in various cancer cells.

27 November 2018

1 reference

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Genetic definition and sequence analysis of Arabidopsis centromeres.

27 November 2018

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Phenotypic heterogeneity of human endogenous retrovirus particles produced by teratocarcinoma cell lines

27 November 2018

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12 December 2020

Expression of human endogenous retrovirus k envelope transcripts in human breast cancer

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12 December 2020

Full-sized HERV-K (HML-2) human endogenous retroviral LTR sequences on human chromosome 21: map locations and evolutionary history

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12 December 2020

Neandertal and Denisovan retroviruses

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12 December 2020

Insertional polymorphisms of full-length endogenous retroviruses in humans

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12 December 2020