The Porifera Ontology (PORO): enhancing sponge systematics with an anatomy ontology (Q28655367)

7

0 references

Melissa Haendel

6

Melissa A Haendel

0 references

Erik Segerdell

Erik Segerdell

5

0 references

Régine Vignes-Lebbe

4

Régine Vignes-Lebbe

0 references

Adeline Kerner

3

Adeline Kerner

0 references

Maria Cristina Díaz

2

Maria Cristina Díaz

0 references

author name string

Robert W Thacker

Journal of Biomedical Semantics

1

0 references

language of work or name

English

0 references

publication date

2014

0 references

published in

1 reference

Next-generation phenomics for the Tree of Life

volume

5

0 references

issue

1

0 references

page(s)

39

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Molecular phylogenies support homoplasy of multiple morphological characters used in the taxonomy of Heteroscleromorpha (Porifera: Demospongiae)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Ontologies as integrative tools for plant science

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

500,000 fish phenotypes: The new informatics landscape for evolutionary and developmental biology of the vertebrate skeleton

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Uberon, an integrative multi-species anatomy ontology

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Cambrian archaeocyathan metazoans: revision of morphological characters and standardization of genus descriptions to establish an online identification tool

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

The Amphimedon queenslandica genome and the evolution of animal complexity

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

A post-synaptic scaffold at the origin of the animal kingdom

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

An ontology for cell types

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Using ontologies to describe mouse phenotypes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Gene ontology: tool for the unification of biology

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

The Origin of Metazoan Complexity: Porifera as Integrated Animals

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

The Drosophila anatomy ontology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Evaluation of research in biomedical ontologies

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Bayesian ontology querying for accurate and noise-tolerant semantic searches

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Origin of metazoan cadherin diversity and the antiquity of the classical cadherin/β-catenin complex

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

The physiology and molecular biology of sponge tissues

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Sponge systematics facing new challenges

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Deep phylogeny and evolution of sponges (phylum Porifera).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Trends in the discovery of new marine natural products from invertebrates over the last two decades--where and what are we bioprospecting?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Time to change how we describe biodiversity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Congruence between nuclear and mitochondrial genes in Demospongiae: a new hypothesis for relationships within the G4 clade (Porifera: Demospongiae).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

OBO-Edit--an ontology editor for biologists

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Phenotype ontologies: the bridge between genomics and evolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Ontologies in biology: design, applications and future challenges

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4177528

Nearly complete 28S rRNA gene sequences confirm new hypotheses of sponge evolution.

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F2041-1480-5-39

Phylogenetic novelties and geographic anomalies among tropical Verongida

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F2041-1480-5-39

Phylogeny and Systematics of Demospongiae in Light of New Small-Subunit Ribosomal DNA (18S) Sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F2041-1480-5-39

Phenotype ontologies: are homology relations central enough? A reply to Deans et al.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F2041-1480-5-39

Formation of siliceous spicules in the marine demosponge Suberites domuncula

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25276334

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/2041-1480-5-39

0 references

DBLP publication ID

journals/biomedsem/ThackerDKVSHM14

1 reference

DBLP Dataset 2021-01-02