Extracting research-quality phenotypes from electronic health records to support precision medicine (Q28648163)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

author name string

Wei-Qi Wei

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

language of work or name

English

0 references

publication date

2015

0 references

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

page(s)

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

10 June 2020

copyright license

start time

30 April 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/s13073-015-0166-y

0 references

cites work

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Complement factor H variant increases the risk of age-related macular degeneration

17 March 2017

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Medical genetics: a marker for Stevens-Johnson syndrome

17 March 2017

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CNVs conferring risk of autism or schizophrenia affect cognition in controls

17 March 2017

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Creation and Validation of an EMR-based Algorithm for Identifying Major Adverse Cardiac Events while on Statins

7 April 2017

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Genotype and risk of major bleeding during warfarin treatment

3 June 2018

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A genome-wide association study of heparin-induced thrombocytopenia using an electronic medical record

3 June 2018

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Phenome-wide association study (PheWAS) in EMR-linked pediatric cohorts, genetically links PLCL1 to speech language development and IL5-IL13 to Eosinophilic Esophagitis

3 June 2018

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Pharmacogenetic meta-analysis of genome-wide association studies of LDL cholesterol response to statins

3 June 2018

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Prioritizing targets for precision cancer medicine

3 June 2018

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Assessing the role of a medication-indication resource in the treatment relation extraction from clinical text

3 June 2018

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Genetic variation in the HLA region is associated with susceptibility to herpes zoster

3 June 2018

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Evaluation of matched control algorithms in EHR-based phenotyping studies: a case study of inflammatory bowel disease comorbidities

3 June 2018

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Phenome-wide association studies demonstrating pleiotropy of genetic variants within FTO with and without adjustment for body mass index

3 June 2018

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Phenome-wide association studies (PheWASs) for functional variants

3 June 2018

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eMERGEing progress in genomics-the first seven years

3 June 2018

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Design and anticipated outcomes of the eMERGE-PGx project: a multicenter pilot for preemptive pharmacogenomics in electronic health record systems

3 June 2018

1 reference

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Research capacity. Enabling the genomic revolution in Africa

3 June 2018

1 reference

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Whole-exome sequencing in familial atrial fibrillation.

3 June 2018

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Inter-terminology mapping of nursing problems

3 June 2018

1 reference

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Clinical pharmacogenetics implementation: approaches, successes, and challenges

3 June 2018

1 reference

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Comorbidity clusters in autism spectrum disorders: an electronic health record time-series analysis

3 June 2018

1 reference

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Development of an ensemble resource linking MEDications to their Indications (MEDI).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Exploiting the potential of large databases of electronic health records for research using rapid search algorithms and an intuitive query interface

3 June 2018

1 reference

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Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data

3 June 2018

1 reference

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Characterization of statin dose response in electronic medical records

3 June 2018

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A genome- and phenome-wide association study to identify genetic variants influencing platelet count and volume and their pleiotropic effects

3 June 2018

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Rare-disease genetics in the era of next-generation sequencing: discovery to translation

3 June 2018

1 reference

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A collaborative approach to developing an electronic health record phenotyping algorithm for drug-induced liver injury

3 June 2018

1 reference

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Identification of acute myocardial infarction from electronic healthcare records using different disease coding systems: a validation study in three European countries

3 June 2018

1 reference

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Caveats for the use of operational electronic health record data in comparative effectiveness research

3 June 2018

1 reference

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A meta-analysis identifies new loci associated with body mass index in individuals of African ancestry

3 June 2018

1 reference

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Validation of electronic medical record-based phenotyping algorithms: results and lessons learned from the eMERGE network

3 June 2018

1 reference

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An algorithm that identifies coronary and heart failure events in the electronic health record

3 June 2018

1 reference

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A PheWAS approach in studying HLA-DRB1*1501.

3 June 2018

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Phenome-wide association study (PheWAS) for detection of pleiotropy within the Population Architecture using Genomics and Epidemiology (PAGE) Network

3 June 2018

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Characterizing biobank organizations in the U.S.: results from a national survey

3 June 2018

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An evaluation of the NQF Quality Data Model for representing Electronic Health Record driven phenotyping algorithms

3 June 2018

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Chapter 13: Mining electronic health records in the genomics era.

3 June 2018

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A clinician-driven automated system for integration of pharmacogenetic interpretations into an electronic medical record

3 June 2018

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3 June 2018

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The absence of longitudinal data limits the accuracy of high-throughput clinical phenotyping for identifying type 2 diabetes mellitus subjects

3 June 2018

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Cross-terminology mapping challenges: a demonstration using medication terminological systems

3 June 2018

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Operational implementation of prospective genotyping for personalized medicine: the design of the Vanderbilt PREDICT project.

3 June 2018

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Electronic medical records as a tool in clinical pharmacology: opportunities and challenges

3 June 2018

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Next-generation sequencing demands next-generation phenotyping

3 June 2018

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Portability of an algorithm to identify rheumatoid arthritis in electronic health records.

3 June 2018

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Predicting warfarin dosage in European-Americans and African-Americans using DNA samples linked to an electronic health record

3 June 2018

1 reference

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Impact of data fragmentation across healthcare centers on the accuracy of a high-throughput clinical phenotyping algorithm for specifying subjects with type 2 diabetes mellitus

3 June 2018

1 reference

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Predicting clopidogrel response using DNA samples linked to an electronic health record.

3 June 2018

1 reference

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The use of a DNA biobank linked to electronic medical records to characterize pharmacogenomic predictors of tacrolimus dose requirement in kidney transplant recipients

3 June 2018

1 reference

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Use of diverse electronic medical record systems to identify genetic risk for type 2 diabetes within a genome-wide association study

3 June 2018

1 reference

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Identification of low-frequency variants associated with gout and serum uric acid levels

3 June 2018

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Variants near FOXE1 are associated with hypothyroidism and other thyroid conditions: using electronic medical records for genome- and phenome-wide studies

3 June 2018

1 reference

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Complement receptor 1 gene variants are associated with erythrocyte sedimentation rate

3 June 2018

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2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text

3 June 2018

1 reference

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Detecting drug interactions from adverse-event reports: interaction between paroxetine and pravastatin increases blood glucose levels.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Using electronic health records to drive discovery in disease genomics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Electronic medical records for genetic research: results of the eMERGE consortium

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

A high throughput semantic concept frequency based approach for patient identification: a case study using type 2 diabetes mellitus clinical notes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

A decade's perspective on DNA sequencing technology

3 June 2018

1 reference

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The emerging role of electronic medical records in pharmacogenomics

3 June 2018

1 reference

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Genetic basis of autoantibody positive and negative rheumatoid arthritis risk in a multi-ethnic cohort derived from electronic health records

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Myocardial infarction and the validation of physician billing and hospitalization data using electronic medical records

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

A genome-wide association study of red blood cell traits using the electronic medical record.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Regional variations in diagnostic practices

3 June 2018

1 reference

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Robust replication of genotype-phenotype associations across multiple diseases in an electronic medical record

3 June 2018

1 reference

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PheWAS: demonstrating the feasibility of a phenome-wide scan to discover gene-disease associations

3 June 2018

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Electronic medical records for discovery research in rheumatoid arthritis

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Serving the enterprise and beyond with informatics for integrating biology and the bedside (i2b2).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Review: electronic health records and the reliability and validity of quality measures: a review of the literature

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

The Nordic countries as a cohort for pharmacoepidemiological research

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Designing genome-wide association studies: sample size, power, imputation, and the choice of genotyping chip

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Validating, augmenting and refining genome-wide association signals

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Issues in mapping LOINC laboratory tests to SNOMED CT

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Association of chromosome 9p21 SNPs with cardiovascular phenotypes in morbid obesity using electronic health record data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Development of a large-scale de-identified DNA biobank to enable personalized medicine.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

HLA-B*5701 screening for hypersensitivity to abacavir

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Implementation of an electronic medical record system in previously computer-naïve primary care centres: a pilot study from Cyprus.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Novel integration of hospital electronic medical records and gene expression measurements to identify genetic markers of maturation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

The BioBank Japan Project.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Identifying patient smoking status from medical discharge records

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Probing genetic overlap among complex human phenotypes.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Nordic biological specimen banks as basis for studies of cancer causes and control--more than 2 million sample donors, 25 million person years and 100,000 prospective cancers

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Kaiser Permanente's experience of implementing an electronic medical record: a qualitative study

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

A Populationwide Coalescent Analysis of Icelandic Matrilineal and Patrilineal Genealogies: Evidence for a Faster Evolutionary Rate of mtDNA Lineages than Y Chromosomes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

"Understanding" medical school curriculum content using KnowledgeMap

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Implementation of clinical guidelines through an electronic medical record: physician usage, satisfaction and assessment

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

The electronic medical record. A randomized trial of its impact on primary care physicians' initial management of major depression [corrected].

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Electronic medical record in the intensive care unit

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

The accuracy of medication data in an outpatient electronic medical record

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

The practice of meta-analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

A common variant at 8q24.21 is associated with renal cell cancer.

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13073-015-0166-Y

Estrogen receptor genotype is associated with risk of venous thromboembolism during tamoxifen therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13073-015-0166-Y

Patients treated at multiple acute health care facilities: quantifying information fragmentation

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13073-015-0166-Y

Pharmacogenomics: the importance of accurate phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13073-015-0166-Y

Opportunities and challenges for the NIH--an interview with Francis Collins. Interview by Robert Steinbrook.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13073-015-0166-Y

Impact of an electronic medical record on quality of care in a primary care office.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4416392

Cohort profile: the Kadoorie Study of Chronic Disease in China (KSCDC)

27 November 2018

1 reference

12 December 2020

Privacy and medical-records research

1 reference

12 December 2020

Missing clinical information during primary care visits

1 reference

12 December 2020

An electronic medical record--delivering benefits today

1 reference

12 December 2020

Implementing an electronic medical record system in ambulatory care

1 reference

12 December 2020

Effectiveness of the electronic medical record in improving the management of hypertension

1 reference

12 December 2020

Japan launches controversial Biobank project

1 reference

12 December 2020

Benefits and obstacles for hospital executives of the electronic medical record

1 reference

12 December 2020

The benefits and challenges of the computerized electronic medical record

1 reference

12 December 2020

10.1186/S13073-015-0166-Y

Identifiers

DOI

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

10 June 2020

1043283986

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25937834%20AND%20SRC:MED&resulttype=core&format=json