Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic Plant Hydnora visseri (Hydnoraceae) (Q28603252)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26739167%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

title

Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic Plant Hydnora visseri (Hydnoraceae) (English)

1 reference

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4 March 2020

Hydnoraceae

1 reference

Hydnora visseri

1 reference

6

1 reference

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4 March 2020

Christoph Neinhuis

10

1 reference

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4 March 2020

11

Stefan Wanke

1 reference

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4 March 2020

12

Claude W dePamphilis

1 reference

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4 March 2020

5

Sarah T Wagner

1 reference

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4 March 2020

author name string

Julia Naumann

1

1 reference

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4 March 2020

Joshua P Der

2

1 reference

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4 March 2020

Eric K Wafula

3

1 reference

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4 March 2020

Samuel S Jones

4

1 reference

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4 March 2020

Paula E Ralph

7

1 reference

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4 March 2020

Jay F Bolin

8

1 reference

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4 March 2020

Erika Maass

9

1 reference

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4 March 2020

language of work or name

English

0 references

publication date

6 January 2016

1 reference

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Genome Biology and Evolution

4 March 2020

published in

1 reference

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4 March 2020

volume

8

1 reference

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4 March 2020

page(s)

345-363

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4 March 2020

issue

2

1 reference

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Major trends in stem anatomy and growth forms in the perianth-bearing Piperales, with special focus on Aristolochia

4 March 2020

cites work

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Single-copy nuclear genes place haustorial Hydnoraceae within piperales and reveal a cretaceous origin of multiple parasitic angiosperm lineages

17 March 2017

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17 March 2017

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Molecular data place Hydnoraceae with Aristolochiaceae

17 March 2017

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Rampant gene loss in the underground orchid Rhizanthella gardneri highlights evolutionary constraints on plastid genomes

17 March 2017

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An organellar maturase associates with multiple group II introns

17 March 2017

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17 March 2017

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Mitochondrial DNA suggests at least 11 origins of parasitism in angiosperms and reveals genomic chimerism in parasitic plants

17 March 2017

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Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis

17 March 2017

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Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns

17 March 2017

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Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta

17 March 2017

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Complete DNA sequences of the plastid genomes of two parasitic flowering plant species, Cuscuta reflexa and Cuscuta gronovii

17 March 2017

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17 March 2017

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Complete plastid genome sequences of Drimys, Liriodendron, and Piper: implications for the phylogenetic relationships of magnoliids

17 March 2017

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17 March 2017

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The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression.

17 March 2017

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The function of genomes in bioenergetic organelles

17 March 2017

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Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs

17 March 2017

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Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant

17 March 2017

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17 March 2017

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Automatic annotation of organellar genomes with DOGMA

7 April 2017

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7 April 2017

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Massive intracellular gene transfer during plastid genome reduction in nongreen Orobanchaceae

7 April 2017

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Plastome Evolution in Hemiparasitic Mistletoes

29 September 2017

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An Exploration into Fern Genome Space.

29 September 2017

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The Highly Reduced Plastome of Mycoheterotrophic Sciaphila (Triuridaceae) Is Colinear with Its Green Relatives and Is under Strong Purifying Selection.

29 September 2017

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The Complete Sequence of the Acacia ligulata Chloroplast Genome Reveals a Highly Divergent clpP1 Gene

29 September 2017

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The massive mitochondrial genome of the angiosperm Silene noctiflora is evolving by gain or loss of entire chromosomes

29 September 2017

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Factors mediating plastid dependency and the origins of parasitism in apicomplexans and their close relatives

29 September 2017

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Exploring the limits for reduction of plastid genomes: a case study of the mycoheterotrophic orchids Epipogium aphyllum and Epipogium roseum.

29 September 2017

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Photosynthesis and chloroplast genes are involved in water-use efficiency in common bean

29 September 2017

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Investigating the path of plastid genome degradation in an early-transitional clade of heterotrophic orchids, and implications for heterotrophic angiosperms

29 September 2017

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Complete sequences of organelle genomes from the medicinal plant Rhazya stricta (Apocynaceae) and contrasting patterns of mitochondrial genome evolution across asterids

29 September 2017

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A plastid without a genome: evidence from the nonphotosynthetic green algal genus Polytomella.

29 September 2017

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Possible loss of the chloroplast genome in the parasitic flowering plant Rafflesia lagascae (Rafflesiaceae)

29 September 2017

1 reference

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The plastid genome of mycoheterotrophic monocot Petrosavia stellaris exhibits both gene losses and multiple rearrangements

29 September 2017

1 reference

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Horizontal transfer of entire genomes via mitochondrial fusion in the angiosperm Amborella.

29 September 2017

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Balanced gene losses, duplications and intensive rearrangements led to an unusual regularly sized genome in Arbutus unedo chloroplasts.

29 September 2017

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Mechanisms of functional and physical genome reduction in photosynthetic and nonphotosynthetic parasitic plants of the broomrape family

29 September 2017

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PAMLX: a graphical user interface for PAML.

29 September 2017

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OrganellarGenomeDRAW--a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

29 September 2017

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Complete chloroplast genome sequence of holoparasite Cistanche deserticola (Orobanchaceae) reveals gene loss and horizontal gene transfer from its host Haloxylon ammodendron (Chenopodiaceae).

29 September 2017

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Uncovering the protein translocon at the chloroplast inner envelope membrane.

29 September 2017

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The plastid genome of the mycoheterotrophic Corallorhiza striata (Orchidaceae) is in the relatively early stages of degradation

29 September 2017

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Evolutionary constraints on the plastid tRNA set decoding methionine and isoleucine.

29 September 2017

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Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics.

29 September 2017

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Sequencing and analysis of plastid genome in mycoheterotrophic orchid Neottia nidus-avis.

29 September 2017

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The evolution and expression of RBCL in holoparasitic sister-genera Harveya and Hyobanche (Orobanchaceae).

29 September 2017

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Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing.

29 September 2017

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The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

29 September 2017

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Rate accelerations in nuclear 18S rDNA of mycoheterotrophic and parasitic angiosperms

29 September 2017

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Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage

29 September 2017

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Recombination and the maintenance of plant organelle genome stability.

29 September 2017

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Implications of the plastid genome sequence of typha (typhaceae, poales) for understanding genome evolution in poaceae

29 September 2017

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Parallel loss of plastid introns and their maturase in the genus Cuscuta

29 September 2017

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A plant-specific RNA-binding domain revealed through analysis of chloroplast group II intron splicing

29 September 2017

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From chloroplasts to "cryptic" plastids: evolution of plastid genomes in parasitic plants.

29 September 2017

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Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants.

29 September 2017

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Why are plastid genomes retained in non-photosynthetic organisms?

29 September 2017

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Photosynthetic evolution in parasitic plants: insight from the chloroplast genome

29 September 2017

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Cutting edge of chloroplast proteolysis

29 September 2017

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Why have organelles retained genomes?

29 September 2017

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Chloroplast and mitochondrial genomes from a liverwort, Marchantia polymorpha--gene organization and molecular evolution

29 September 2017

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Chloroplast DNA rearrangements are more frequent when a large inverted repeat sequence is lost

29 September 2017

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Comparative organization of chloroplast genomes

29 September 2017

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Evolutionary transfer of the chloroplast tufA gene to the nucleus.

29 September 2017

1 reference

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Organization of the flagellar apparatus and associate cytoplasmic microtubules in the quadriflagellate alga Polytomella agilis

29 September 2017

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A long PCR-based approach for DNA enrichment prior to next-generation sequencing for systematic studies

29 September 2017

1 reference

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Plastid genome evolution across the genus Cuscuta (Convolvulaceae): two clades within subgenus Grammica exhibit extensive gene loss

3 June 2018

1 reference

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Relative rates of synonymous substitutions in the mitochondrial, chloroplast and nuclear genomes of seed plants

3 June 2018

1 reference

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OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes.

3 June 2018

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A subset of conserved tRNA genes in plastid DNA of nongreen plants.

3 June 2018

1 reference

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Impaired splicing of the rps12 transcript in ribosome-deficient plastids.

3 June 2018

1 reference

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Transcription, splicing and editing of plastid RNAs in the nonphotosynthetic plant Epifagus virginiana.

3 June 2018

1 reference

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A New Species of Hydnora (Hydnoraceae) from Southern Africa

3 June 2018

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Plastid genome evolution in mycoheterotrophic Ericaceae.

21 January 2018

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https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

Degradation of chloroplast DNA during natural senescence of maple leaves.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

Power analysis of tests for loss of selective constraint in cave crayfish and nonphotosynthetic plant lineages.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

Gene transfer to the nucleus and the evolution of chloroplasts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

YCF1: A Green TIC: Response to the de Vries et al. Commentary.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

Do nonasterid holoparasitic flowering plants have plastid genomes?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

The plastid genomes of flowering plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

The carbohydrate economy of cacti

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

Nucleotide Substitution Rates in Legume Chloroplast DNA Depend on the Presence of the Inverted Repeat

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

Loss of photosynthetic and chlororespiratory genes from the plastid genome of a parasitic flowering plant

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

21 January 2018

Mercury risk from teeth

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV256

Extensive rearrangements in the chloroplast genome of Trachelium caeruleum are associated with repeats and tRNA genes

21 January 2018

1 reference

12 December 2020

Extensive reorganization of the plastid genome of Trifolium subterraneum (Fabaceae) is associated with numerous repeated sequences and novel DNA insertions

1 reference

12 December 2020

SIX INDEPENDENT LOSSES OF THE CHLOROPLAST DNA rpl2 INTRON IN DICOTYLEDONS: MOLECULAR AND PHYLOGENETIC IMPLICATIONS.

1 reference

12 December 2020

Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence

1 reference

12 December 2020

Identifiers

DOI

10.1093/GBE/EVV256

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26739167%20AND%20SRC:MED&resulttype=core&format=json

release_4sg3ybvktbbthkbgq6xcr2gntu

4 March 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/4sg3ybvktbbthkbgq6xcr2gntu

24 November 2022

mapped directly with Wikidata item

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26739167%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26739167%20AND%20SRC:MED&resulttype=core&format=json