EBI metagenomics in 2016--an expanding and evolving resource for the analysis and archiving of metagenomic data (Q28603058)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26582919%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Alex Mitchell

1

1 reference

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7 June 2020

Guy R. Cochrane

3

1 reference

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7 June 2020

Hubert Denise

4

1 reference

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7 June 2020

Petra Ten Hoopen

5

1 reference

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7 June 2020

Matthew Fraser

6

1 reference

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7 June 2020

Sebastien Pesseat

7

1 reference

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7 June 2020

Simon C Potter

8

1 reference

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7 June 2020

Maxim Scheremetjew

9

1 reference

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7 June 2020

Peter Sterk

10

1 reference

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7 June 2020

author name string

Francois Bucchini

2

1 reference

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7 June 2020

language of work or name

English

0 references

publication date

4 January 2016

0 references

published in

Nucleic Acids Research

1 reference

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7 June 2020

volume

44

1 reference

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7 June 2020

issue

D1

1 reference

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7 June 2020

page(s)

D595-603

1 reference

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Creative Commons Attribution 4.0 International

7 June 2020

copyright license

start time

15 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards

1 reference

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The ocean sampling day consortium

17 March 2017

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The InterPro protein families database: the classification resource after 15 years

17 March 2017

1 reference

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Content discovery and retrieval services at the European Nucleotide Archive

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Characterization of the core rumen microbiome in cattle during transition from forage to concentrate as well as during and after an acidotic challenge

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Structure, function and diversity of the healthy human microbiome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

17 March 2017

1 reference

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Gene ontology: tool for the unification of biology

17 March 2017

1 reference

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Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

A metagenome-wide association study of gut microbiota in type 2 diabetes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Activities at the Universal Protein Resource (UniProt)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Ocean plankton. Determinants of community structure in the global plankton interactome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Ocean plankton. Patterns and ecological drivers of ocean viral communities

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Ocean plankton. Environmental characteristics of Agulhas rings affect interocean plankton transport

29 September 2017

1 reference

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Ocean plankton. Structure and function of the global ocean microbiome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Metagenomic approach reveals variation of microbes with arsenic and antimony metabolism genes from highly contaminated soil

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Discovery of microorganisms and enzymes involved in high-solids decomposition of rice straw using metagenomic analyses

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

EBI metagenomics--a new resource for the analysis and archiving of metagenomic data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

IMG/M 4 version of the integrated metagenome comparative analysis system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Comparative metagenomic analysis of bacterial populations in three full-scale mesophilic anaerobic manure digesters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

From soil to structure, a novel dimeric β-glucosidase belonging to glycoside hydrolase family 3 isolated from compost using metagenomic analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Comparison of the fecal microbiota of healthy horses and horses with colitis by high throughput sequencing of the V3-V5 region of the 16S rRNA gene

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Modulations of the chicken cecal microbiome and metagenome in response to anticoccidial and growth promoter treatment

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Chemical synthesis using synthetic biology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

Microbial ecology and evolution: a ribosomal RNA approach

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702853

29 September 2017

Identifiers

DOI

10.1093/NAR/GKV1195

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26582919%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/MitchellBCDHFPP16

7 June 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26582919%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

PubMed publication ID

26582919

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26582919%20AND%20SRC:MED&resulttype=core&format=json