Evolutionary relationships within the lamioid tribe Synandreae (Lamiaceae) based on multiple low-copy nuclear loci (Q28595952)

2

0 references

Drake M G Garner

3

0 references

Philip D Cantino

4

0 references

Anne-Cathrine Scheen

5

0 references

Charlotte Lindqvist

Creative Commons Attribution 4.0 International

6

0 references

language of work or name

English

0 references

publication date

2016

0 references

1 reference

4

0 references

page(s)

e2220

0 references

copyright license

start time

20 July 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Phylogeny of Campanuloideae (Campanulaceae) with emphasis on the utility of nuclear pentatricopeptide repeat (PPR) genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Distribution of living Cupressaceae reflects the breakup of Pangea

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Origin of the Hawaiian endemic mints within North American Stachys (Lamiaceae)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Phylogeography and allopatric divergence of cypress species (Cupressus L.) in the Qinghai-Tibetan Plateau and adjacent regions

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

A rapid bootstrap algorithm for the RAxML Web servers

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

jModelTest: phylogenetic model averaging

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

The impact of Miocene atmospheric carbon dioxide fluctuations on climate and the evolution of terrestrial ecosystems

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

BEAST: Bayesian evolutionary analysis by sampling trees

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Clustal W and Clustal X version 2.0

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Application of phylogenetic networks in evolutionary studies

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Patterns in the assembly of temperate forests around the Northern Hemisphere

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

MRBAYES: Bayesian inference of phylogenetic trees

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

The role of genetic and genomic attributes in the success of polyploids

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Genome evolution in polyploids

17 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

17 March 2017

Dispersals of Hyoscyameae and Mandragoreae (Solanaceae) from the New World to Eurasia in the early Miocene and their biogeographic diversification within Eurasia

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Pentatricopeptide Repeat Proteins in Plants

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Phylogenetic placement of the enigmatic genus Holocheila (Lamiaceae) inferred from plastid DNA sequences

7 April 2017

1 reference

The Continuing Search: Low-Copy Nuclear Sequences for Lower-Level Plant Molecular Phylogenetic Studies

22 April 2017

1 reference

Molecular Phylogeny of Helleborus (Ranunculaceae), with an Emphasis on the East Asian-Mediterranean Disjunction

22 April 2017

1 reference

Evolutionary response of Caragana (Fabaceae) to Qinghai–Tibetan Plateau uplift and Asian interior aridification

22 April 2017

1 reference

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Phylogeographic insights into cryptic glacial refugia

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Hybridization and adaptive radiation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

S-DIVA (Statistical Dispersal-Vicariance Analysis): A tool for inferring biogeographic histories

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

SplitsTree: analyzing and visualizing evolutionary data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Distinguishing Homologous from Analogous Proteins

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Evolution of Eastern Asian and Eastern North American Disjunct Distributions in Flowering Plants

7 April 2017

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

New insights into evolutionary relationships within the subfamily Lamioideae (Lamiaceae) based on pentatricopeptide repeat (PPR) nuclear DNA sequences.

28 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Untangling reticulate evolutionary relationships among New World and Hawaiian mints (Stachydeae, Lamiaceae).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

The influence of gene flow on species tree estimation: a simulation study

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Development of phylogenetic markers from single-copy nuclear genes for multi locus, species level analyses in the mint family (Lamiaceae).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Developing markers for multilocus phylogenetics in non-model organisms: A test case with turtles

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Genes encoding pentatricopeptide repeat (PPR) proteins are not conserved in location in plant genomes and may be subject to diversifying selection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

From famine to feast? Selecting nuclear DNA sequence loci for plant species-level phylogeny reconstruction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

A simple and robust statistical test for detecting the presence of recombination

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Clustering of contact zones, hybrid zones, and phylogeographic breaks in North America

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Utility of low-copy nuclear gene sequences in plant phylogenetics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Perspectives: paleoecology. The refugial debate.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Arabidopsis NPH1: a flavoprotein with the properties of a photoreceptor for phototropism.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Molecular phylogeny and biogeography of the Qinghai-Tibet Plateau endemic Nannoglottis (Asteraceae).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

Systematic Implications of Pollen Morphology in Subfamilies Lamioideae and Pogostemonoideae (Labiatae)

3 June 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Arabidopsis NPL1: a phototropin homolog controlling the chloroplast high-light avoidance response.

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Phot1 and phot2 mediate blue light regulation of stomatal opening

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Accounting for phylogenetic uncertainty in biogeography: a Bayesian approach to dispersal-vicariance analysis of the thrushes (Aves: Turdus).

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Molecular Phylogenetics, Character Evolution, and Suprageneric Classification of Lamioideae (Lamiaceae)1

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Molecular phylogenetics of tribe Synandreae, a North American lineage of lamioid mints (Lamiaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Comparative phylogeography of unglaciated eastern North America

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Systematic study of the genusBrazoria (Lamiaceae), andWarnockia (Lamiaceae), a new genus from Texas

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Phylogeny inLabiatae s. l., inferred from cpDNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Evolution and phylogenetic utility of the PHOT gene duplicates in the Verbena complex (Verbenaceae): dramatic intron size variation and footprint of ancestral recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Global Changes During the Last 3 Million Years: Climatic Controls and Biotic Responses

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

Phylogeny and biogeography of New World Stachydeae (Lamiaceae) with emphasis on the origin and diversification of Hawaiian and South American taxa.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4958014

The Phototropin Family of Photoreceptors

27 November 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.2220

The pentatricopeptide repeat (PPR) gene family, a tremendous resource for plant phylogenetic studies

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27547537

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

An empirical demonstration of using pentatricopeptide repeat (PPR) genes as plant phylogenetic tools: phylogeny of Verbenaceae and the Verbena complex

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27547537