Ikaros interacts with P-TEFb and cooperates with GATA-1 to enhance transcription elongation (Q28585478)

GATA binding protein 1

1 reference

Cyclin-dependent kinase 9 (CDC2-related kinase)

1 reference

1 reference

Chromodomain helicase DNA binding protein 4

1 reference

GATA binding protein 2

1 reference

DNA-binding protein Ikaros

1 reference

TATA box binding protein

1 reference

Lysine (K)-specific demethylase 2B

1 reference

author name string

Stefania Bottardi

1

1 reference

31 January 2017

Farah A. Zmiri

2

1 reference

31 January 2017

Vincent Bourgoin

3

1 reference

31 January 2017

Julie Ross

4

1 reference

31 January 2017

Lionel Mavoungou

5

1 reference

31 January 2017

Eric Milot

Creative Commons Attribution-NonCommercial 2.5 Generic

6

1 reference

31 January 2017

language of work or name

English

0 references

publication date

1 May 2011

1 reference

31 January 2017

Nucleic Acids Research

1 reference

31 January 2017

39

1 reference

31 January 2017

3505–3519

1 reference

31 January 2017

9

1 reference

31 January 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageJ

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3089448/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Multiple functions of Ldb1 required for beta-globin activation during erythroid differentiation

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Discovering hematopoietic mechanisms through genome-wide analysis of GATA factor chromatin occupancy

17 March 2017

1 reference

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Developmental and species-divergent globin switching are driven by BCL11A

17 March 2017

1 reference

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Early steps in the DNA base excision/single-strand interruption repair pathway in mammalian cells

17 March 2017

1 reference

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A Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in beta-globin expression and erythroid development

17 March 2017

1 reference

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GATA-1 forms distinct activating and repressive complexes in erythroid cells

17 March 2017

1 reference

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Ikaros SUMOylation: switching out of repression

17 March 2017

1 reference

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T to C substitution at -175 or -173 of the gamma-globin promoter affects GATA-1 and Oct-1 binding in vitro differently but can independently reproduce the hereditary persistence of fetal hemoglobin phenotype in transgenic mice

17 March 2017

1 reference

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The active spatial organization of the beta-globin locus requires the transcription factor EKLF

17 March 2017

1 reference

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Immunoaffinity purification of mammalian protein complexes

17 March 2017

1 reference

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Functional overlap of GATA-1 and GATA-2 in primitive hematopoietic development

17 March 2017

1 reference

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An embryonic/fetal beta-type globin gene repressor contains a nuclear receptor TR2/TR4 heterodimer

17 March 2017

1 reference

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Ikaros-CtIP interactions do not require C-terminal binding protein and participate in a deacetylase-independent mode of repression

17 March 2017

1 reference

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Multiple hematopoietic defects and delayed globin switching in Ikaros null mice

17 March 2017

1 reference

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Unconventional potentiation of gene expression by Ikaros

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

A new mathematical model for relative quantification in real-time RT-PCR

17 March 2017

1 reference

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A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Repression by Ikaros and Aiolos is mediated through histone deacetylase complexes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Ikaros DNA-binding proteins direct formation of chromatin remodeling complexes in lymphocytes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

FOG-2: A novel GATA-family cofactor related to multitype zinc-finger proteins Friend of GATA-1 and U-shaped

17 March 2017

1 reference

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Tissue-specific and developmental stage-specific DNA binding by a mammalian SWI/SNF complex associated with human fetal-to-adult globin gene switching

17 March 2017

1 reference

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17 March 2017

1 reference

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Zinc finger-mediated protein interactions modulate Ikaros activity, a molecular control of lymphocyte development

17 March 2017

1 reference

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DNA-binding specificities of the GATA transcription factor family

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

The Ikaros gene encodes a family of functionally diverse zinc finger DNA-binding proteins

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

A single cis element maintains repression of the key developmental regulator Gata2.

17 March 2017

1 reference

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Transcriptional silencing of {gamma}-globin by BCL11A involves long-range interactions and cooperation with SOX6.

29 September 2017

1 reference

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Awakening lineage potential by Ikaros-mediated transcriptional priming

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

USF and NF-E2 cooperate to regulate the recruitment and activity of RNA polymerase II in the beta-globin gene locus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Role of STAT3 and GATA-1 interactions in gamma-globin gene expression

29 September 2017

1 reference

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BRG1 requirement for long-range interaction of a locus control region with a downstream promoter.

29 September 2017

1 reference

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Cutting edge: Ikaros is a regulator of Th2 cell differentiation

29 September 2017

1 reference

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Human fetal hemoglobin expression is regulated by the developmental stage-specific repressor BCL11A.

29 September 2017

1 reference

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Role of the cyclin-dependent kinase 9-related pathway in mammalian gene expression and human diseases

29 September 2017

1 reference

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Cross-talk of GATA-1 and P-TEFb in megakaryocyte differentiation

29 September 2017

1 reference

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Epigenetics of beta-globin gene regulation

29 September 2017

1 reference

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Poised polymerases: on your mark...get set...go!

29 September 2017

1 reference

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Silencing of Agamma-globin gene expression during adult definitive erythropoiesis mediated by GATA-1-FOG-1-Mi2 complex binding at the -566 GATA site.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

The chromatin-remodeling enzyme BRG1 plays an essential role in primitive erythropoiesis and vascular development

29 September 2017

1 reference

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A positive role for NLI/Ldb1 in long-range beta-globin locus control region function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Predominant interaction of both Ikaros and Helios with the NuRD complex in immature thymocytes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Dissecting molecular steps in chromatin domain activation during hematopoietic differentiation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Ikaros and chromatin regulation in early hematopoiesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Novel binding partners of Ldb1 are required for haematopoietic development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Differential sensitivities of transcription factor target genes underlie cell type-specific gene expression profiles.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Breaking barriers to transcription elongation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Lineage-specific activators affect beta-globin locus chromatin in multipotent hematopoietic progenitors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Mast cell IL-4 expression is regulated by Ikaros and influences encephalitogenic Th1 responses in EAE

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Proximity among distant regulatory elements at the beta-globin locus requires GATA-1 and FOG-1.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

GATA1 function, a paradigm for transcription factors in hematopoiesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Cellular control of gene expression by T-type cyclin/CDK9 complexes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

SCL assembles a multifactorial complex that determines glycophorin A expression.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Spatial organization of gene expression: the active chromatin hub.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Highly restricted localization of RNA polymerase II within a locus control region of a tissue-specific chromatin domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

The beta -globin locus control region (LCR) functions primarily by enhancing the transition from transcription initiation to elongation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Transcriptional specificity of human SWI/SNF BRG1 and BRM chromatin remodeling complexes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Cooperative activities of hematopoietic regulators recruit RNA polymerase II to a tissue-specific chromatin domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

An ikaros-containing chromatin-remodeling complex in adult-type erythroid cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Defects in hemopoietic stem cell activity in Ikaros mutant mice

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Selective defects in the development of the fetal and adult lymphoid system in mice with an Ikaros null mutation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Chromatin interaction mechanism of transcriptional control in vivo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

DNA-binding specificity of GATA family transcription factors

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Developmental regulation of a complete 70-kb human beta-globin locus in transgenic mice

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

The CD8alpha gene locus is regulated by the Ikaros family of proteins.

3 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ1271

Antagonistic interactions between Ikaros and the chromatin remodeler Mi-2beta determine silencer activity and Cd4 gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ1271

Ikaros and GATA-1 combinatorial effect is required for silencing of human gamma-globin genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ1271

The beta-globin nuclear compartment in development and erythroid differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ1271

NuRD mediates activating and repressive functions of GATA-1 and FOG-1 during blood development

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ1271

A mechanism for Ikaros regulation of human globin gene switching.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Development of erythroid and myeloid progenitors in the yolk sac and embryo proper of the mouse.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3089448

Levels of GATA-1/GATA-2 transcription factors modulate expression of embryonic and fetal hemoglobins

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21245044

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Binding of Ikaros to the lambda5 promoter silences transcription through a mechanism that does not require heterochromatin formation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21245044

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ1271

1 reference

4746943

4746943

1 reference

1 reference

1 reference