Reactome: a database of reactions, pathways and biological processes (Q28298042)

19

Ewan Birney

0 references

Phani Garapati

Phani Garapati

8

0 references

Nelson Ndegwa

Nelson Ndegwa

15

0 references

David Croft

David Croft

1

0 references

Christina K. Yung

Christina Yung

18

0 references

Lisa Matthews

Lisa Matthews

6

0 references

Irina Kalatskaya

Irina Kalatskaya

12

0 references

Robin Haw

Robin Haw

4

0 references

Marc Gillespie

Marc Gillespie

5

0 references

Steven Jupe

Steven Jupe

11

0 references

Peter D'Eustachio

Peter D'Eustachio

21

0 references

Bijay Jassal

Bijay Jassal

10

0 references

Lincoln Stein

22

Lincoln Stein

0 references

author name string

Gavin O'Kelly

2

0 references

Guanming Wu

3

0 references

Michael Caudy

7

0 references

Gopal Gopinath

9

0 references

Shahana Mahajan

13

0 references

Bruce May

14

0 references

Esther Schmidt

16

0 references

Veronica Shamovsky

Creative Commons Attribution-NonCommercial 2.5 Generic

17

0 references

language of work or name

English

0 references

publication date

January 2011

0 references

published in

Nucleic Acids Research

0 references

volume

39

0 references

page(s)

D691-7

0 references

issue

Database issue

0 references

copyright license

start time

14 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The BioPAX community standard for pathway data sharing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Database resources of the National Center for Biotechnology Information

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

KEGG for representation and analysis of molecular networks involving diseases and drugs

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Automated docking screens: a feasibility study

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

STRING 8--a global view on proteins and their functional interactions in 630 organisms

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

PID: the Pathway Interaction Database

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

iRefIndex: a consolidated protein interaction database with provenance

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

WikiPathways: pathway editing for the people

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The BioGRID Interaction Database: 2008 update

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

A second generation human haplotype map of over 3.1 million SNPs

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

dbSNP: the NCBI database of genetic variation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The IntAct molecular interaction database in 2010

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Text mining and manual curation of chemical-gene-disease networks for the comparative toxicogenomics database (CTD)

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Infrastructure for the life sciences: design and implementation of the UniProt website

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The UCSC Genome Browser database: update 2010

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

MINT, the molecular interaction database: 2009 update

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The Systems Biology Graphical Notation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Reactome knowledgebase of human biological pathways and processes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The systematic annotation of the three main GPCR families in Reactome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

A human functional protein interaction network and its application to cancer data analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The Gene Ontology in 2010: extensions and refinements

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

ENFIN--A European network for integrative systems biology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The NCBI BioSystems database

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The Gene Ontology's Reference Genome Project: a unified framework for functional annotation across species

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

ChEBI: an open bioinformatics and cheminformatics resource

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

ChEMBL. An interview with John Overington, team leader, chemogenomics at the European Bioinformatics Institute Outstation of the European Molecular Biology Laboratory (EMBL-EBI). Interview by Wendy A. Warr

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Integration of CellDesigner and SABIO-RK.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Data Deposition and Annotation at the Worldwide Protein Data Bank

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

The PSI-MOD community standard for representation of protein modification data.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

GSEA-P: a desktop application for Gene Set Enrichment Analysis.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013646

Cytoscape: a community-based framework for network modeling

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21067998

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ1018

1 reference

journals/nar/CroftOWHGMCGGJJKMMNSSYBHDS11

123948

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

123948

1 reference

1 reference

1 reference