Microsatellites: simple sequences with complex evolution (Q28262642)

Initial sequencing and analysis of the human genome

Europe PubMed Central

title

Microsatellites: simple sequences with complex evolution (English)

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1

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language of work or name

English

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publication date

June 2004

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published in

Nature Reviews Genetics

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volume

5

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issue

6

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page(s)

435-45

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cites work

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Initial sequencing and comparative analysis of the mouse genome

21 April 2017

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Genome sequence of the Brown Norway rat yields insights into mammalian evolution

21 April 2017

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Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae

21 April 2017

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Equilibrium distributions of microsatellite repeat length resulting from a balance between slippage events and point mutations

21 April 2017

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Characteristics and frequency of germline mutations at microsatellite loci from the human Y chromosome, as revealed by direct observation in father/son pairs.

21 April 2017

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Mutation rate in human microsatellites: influence of the structure and length of the tandem repeat

21 April 2017

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Mutability of microsatellites developed for the ant Camponotus consobrinus

21 April 2017

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Human minisatellite mutation rate after the Chernobyl accident

21 April 2017

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Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair

21 April 2017

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High resolution of human evolutionary trees with polymorphic microsatellites

21 April 2017

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Evidence for the adaptive evolution of mutation rates

21 April 2017

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Comparative analysis of amino acid repeats in rodents and humans

21 January 2018

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Microsatellite evolution inferred from human-chimpanzee genomic sequence alignments

21 January 2018

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High density of long dinucleotide microsatellites in Drosophila subobscura.

21 January 2018

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Drosophila virilis has long and highly polymorphic microsatellites.

21 January 2018

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Microsatellites in different eukaryotic genomes: survey and analysis

21 January 2018

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Differential distribution of simple sequence repeats in eukaryotic genome sequences.

21 January 2018

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Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes

21 January 2018

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Distribution of dinucleotide microsatellites in the Drosophila melanogaster genome.

21 January 2018

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Alu repeats: a source for the genesis of primate microsatellites.

21 January 2018

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Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley

21 January 2018

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Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential

21 January 2018

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Mobile elements and the genesis of microsatellites in dipterans.

21 January 2018

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Abundant microsatellite polymorphism in Saccharomyces cerevisiae, and the different distributions of microsatellites in eight prokaryotes and S. cerevisiae, result from strong mutation pressures and a variety of selective forces

21 January 2018

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The microsatellites of Escherichia coli: rapidly evolving repetitive DNAs in a non-pathogenic prokaryote

21 January 2018

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Microsatellite behavior with range constraints: parameter estimation and improved distances for use in phylogenetic reconstruction

21 January 2018

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Dinucleotide repeats in the Drosophila and human genomes have complex, length-dependent mutation processes

21 January 2018

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Markov chain Monte Carlo analysis of human Y-chromosome microsatellites provides evidence of biased mutation

21 January 2018

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Single-locus tests of microsatellite evolution: multi-step mutations and constraints on allele size.

21 January 2018

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Two Distinct Modes of Microsatellite Mutation Processes: Evidence From the Complete Genomic Sequences of Nine Species

21 January 2018

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Positive correlation between DNA polymerase alpha-primase pausing and mutagenesis within polypyrimidine/polypurine microsatellite sequences

21 January 2018

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Taq DNA polymerase slippage mutation rates measured by PCR and quasi-likelihood analysis: (CA/GT)n and (A/T)n microsatellites

21 January 2018

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Two modes of germline instability at human minisatellite MS1 (locus D1S7): complex rearrangements and paradoxical hyperdeletion.

21 January 2018

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GT repeats are associated with recombination on human chromosome 22.

21 January 2018

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The evolutionarily conserved repetitive sequence d(TG.AC)n promotes reciprocal exchange and generates unusual recombinant tetrads during yeast meiosis

21 January 2018

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Mutation patterns at dinucleotide microsatellite loci in humans

21 January 2018

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Estimating Y chromosome specific microsatellite mutation frequencies using deep rooting pedigrees.

21 January 2018

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Heterogeneity in the rate and pattern of germline mutation at individual microsatellite loci

21 January 2018

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Zebrafish genetic map with 2000 microsatellite markers

21 January 2018

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Mutation rates at two human Y-chromosomal microsatellite loci using small pool PCR techniques

21 January 2018

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Y-chromosomal microsatellite mutation rates: differences in mutation rate between and within loci

21 January 2018

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Domain-level differences in microsatellite distribution and content result from different relative rates of insertion and deletion mutations

21 January 2018

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Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis

21 January 2018

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The birth of microsatellites.

21 January 2018

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Phylogenetic assessment of length variation at a microsatellite locus

21 January 2018

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Complex evolution of a salmonid microsatellite locus and its consequences in inferring allelic divergence from size information.

21 January 2018

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Patterns of molecular evolution in avian microsatellites

21 January 2018

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Removal of microsatellite interruptions by DNA replication slippage: phylogenetic evidence from Drosophila.

21 January 2018

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The death of a microsatellite: a phylogenetic perspective on microsatellite interruptions.

21 January 2018

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Conservation of polymorphic simple sequence loci in cetacean species

21 January 2018

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Microsatellite mutations in the germline: implications for evolutionary inference

21 January 2018

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The structure of interrupted human AC microsatellites.

21 January 2018

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Conservation of locus-specific microsatellite variability across species: a comparison of two Drosophila sibling species, D. melanogaster and D. simulans.

21 January 2018

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Mutation rate variation in the mammalian genome

21 January 2018

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Single-Molecule Analysis of the Hypermutable Tetranucleotide Repeat Locus D21S1245 Through Sperm Genotyping: A Heterogeneous Pattern of Mutation but no Clear Male Age Effect

21 January 2018

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Instability of simple sequence DNA in Saccharomyces cerevisiae

21 January 2018

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Microsatellite instability in yeast: dependence on repeat unit size and DNA mismatch repair genes

21 January 2018

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Role of proofreading and mismatch repair in maintaining the stability of nucleotide repeats in DNA.

21 January 2018

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Hypermutability of homonucleotide runs in mismatch repair and DNA polymerase proofreading yeast mutants.

21 January 2018

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Relative rates of insertion and deletion mutations in dinucleotide repeats of various lengths in mismatch repair proficient mouse and mismatch repair deficient human cells.

21 January 2018

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Sequence interruptions confer differential stability at microsatellite alleles in mismatch repair-deficient cells

21 January 2018

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Orientation dependence of trinucleotide CAG repeat instability in Saccharomyces cerevisiae

21 January 2018

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Mutational analyses of dinucleotide and tetranucleotide microsatellites in Escherichia coli: influence of sequence on expansion mutagenesis

21 January 2018

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Relative stabilities of dinucleotide and tetranucleotide repeats in cultured mammalian cells

21 January 2018

1 reference

Sequence dependent instability of mononucleotide microsatellites in cultured mismatch repair proficient and deficient mammalian cells

21 January 2018

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Relative rates of insertion and deletion mutations in a microsatellite sequence in cultured cells

21 January 2018

1 reference

Mismatch repair-driven mutational bias in D. melanogaster

21 January 2018

1 reference

Directional evolution of size coupled with ascertainment bias for variation in Drosophila microsatellites.

21 January 2018

1 reference

Hitchhiking mapping--functional genomics from the population genetics perspective

21 January 2018

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Fitness loss and germline mutations in barn swallows breeding in Chernobyl

21 January 2018

1 reference

Extremely complex pattern of microsatellite mutation in the germline of wheat exposed to the post-Chernobyl radioactive contamination.

21 January 2018

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A second-generation linkage map of the human genome

21 January 2018

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DNA typing of museum birds

21 January 2018

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Selfish genes, the phenotype paradigm and genome evolution

21 January 2018

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Selfish DNA: the ultimate parasite

31 March 2020

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Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms

31 March 2020

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Mutation of human short tandem repeats

31 March 2020

1 reference

Simple sequences in a "minimal' genome.

31 March 2020

1 reference

The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates

31 March 2020

1 reference

A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population

31 March 2020

1 reference

Measures of variation at DNA repeat loci under a general stepwise mutation model

31 March 2020

1 reference

Mutational processes of simple-sequence repeat loci in human populations.

31 March 2020

1 reference

Bayesian estimation of range for microsatellite loci

31 March 2020

1 reference

A new genetic distance with application to constrained variation at microsatellite loci

31 March 2020

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The length distribution of perfect dimer repetitive DNA is consistent with its evolution by an unbiased single-step mutation process.

31 March 2020

1 reference

High frequencies of short frameshifts in poly-CA/TG tandem repeats borne by bacteriophage M13 in Escherichia coli K-12.

31 March 2020

1 reference

Slippage synthesis of simple sequence DNA

31 March 2020

1 reference

A study of the origin of 'shadow bands' seen when typing dinucleotide repeat polymorphisms by the PCR

31 March 2020

1 reference

The determination of the sequences present in the shadow bands of a dinucleotide repeat PCR.

31 March 2020

1 reference

Single paternity of clutches and sperm storage in the promiscuous green turtle (Chelonia mydas)

31 March 2020

1 reference

Microsatellite mutations in litters of the Australian lizard Egernia stokesii

31 March 2020

1 reference

Microsatellites show mutational bias and heterozygote instability

31 March 2020

1 reference

Heterogeneous mutation processes in human microsatellite DNA sequences

31 March 2020

1 reference

The direction of microsatellite mutations is dependent upon allele length

31 March 2020

1 reference

Directional evolution in germline microsatellite mutations

31 March 2020

1 reference

Microsatellite evolution at two hypervariable loci revealed by extensive avian pedigrees

31 March 2020

1 reference

Insertions, substitutions, and the origin of microsatellites

31 March 2020

1 reference

Low mutation rates of microsatellite loci in Drosophila melanogaster

31 March 2020

1 reference

The mutational spectrum of human autosomal tetranucleotide microsatellites

31 March 2020

1 reference

Allelic diversity in alligator microsatellite loci is negatively correlated with GC content of flanking sequences and evolutionary conservation of PCR amplifiability

31 March 2020

1 reference

Microsatellite variability differs between dinucleotide repeat motifs-evidence from Drosophila melanogaster

31 March 2020

1 reference

Transcription-coupled repair deficiency and mutations in human mismatch repair genes

31 March 2020

1 reference

A relationship between lengths of microsatellites and nearby substitution rates in mammalian genomes

31 March 2020

1 reference

Stabilization of the intermediate in frameshift mutation

31 March 2020

1 reference

Mutations in the MSH3 gene preferentially lead to deletions within tracts of simple repetitive DNA in Saccharomyces cerevisiae

31 March 2020

1 reference

Power of genome-wide linkage disequilibrium testing by using microsatellite markers

31 March 2020

1 reference

Duplication/deletion polymorphism 5′- to the human β globin gene

31 March 2020

1 reference

A member of a new repeated sequence family which is conserved throughout eucaryotic evolution is found between the human δ and β globin genes

31 March 2020

1 reference

Potential Z-DNA forming sequences are highly dispersed in the human genome.

31 March 2020

1 reference

Hypervariable 'minisatellite' regions in human DNA.

31 March 2020

1 reference

Cryptic simplicity in DNA is a major source of genetic variation.

31 March 2020

1 reference

Hypervariabflity of simple sequences as a general source for polymorphic DNA markers

31 March 2020

1 reference

Non-fatherhood or mutation?

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NRG1348

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Consolidated OpenCitations Corpus – April 2017

Dimensions Publication ID

722189

1012004609

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722189

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Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

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