Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation (Q28252581)

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2 February 2020

title

Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation (English)

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2 February 2020

5

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2 February 2020

Kai Papenfort

2

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2 February 2020

Jay C. D. Hinton

4

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2 February 2020

author name string

Verena Pfeiffer

1

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2 February 2020

Sacha Lucchini

3

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2 February 2020

language of work or name

English

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publication date

20 July 2009

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Nature Structural & Molecular Biology

2 February 2020

published in

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2 February 2020

volume

16

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2 February 2020

page(s)

840-846

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2 February 2020

issue

8

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Regulatory RNAs in bacteria

2 February 2020

cites work

1 reference

A rough guide to the non-coding RNA world of Salmonella

31 March 2020

1 reference

Target identification of small noncoding RNAs in bacteria

31 March 2020

1 reference

The small RNA regulators of Escherichia coli: roles and mechanisms*

31 March 2020

1 reference

The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs

31 March 2020

1 reference

Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction

31 March 2020

1 reference

Hfq is necessary for regulation by the untranslated RNA DsrA

31 March 2020

1 reference

Mechanism of RNA silencing by Hfq-binding small RNAs

31 March 2020

1 reference

Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli

31 March 2020

1 reference

The poly(A) binding protein Hfq protects RNA from RNase E and exoribonucleolytic degradation

31 March 2020

1 reference

Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAs

31 March 2020

1 reference

A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA)

31 March 2020

1 reference

Small RNA binding to 5' mRNA coding region inhibits translational initiation

31 March 2020

1 reference

MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli

31 March 2020

1 reference

Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.

31 March 2020

1 reference

fhlA repression by OxyS RNA: kissing complex formation at two sites results in a stable antisense-target RNA complex

31 March 2020

1 reference

Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression

31 March 2020

1 reference

RNA, but not protein partners, is directly responsible for translational silencing by a bacterial Hfq-binding small RNA.

31 March 2020

1 reference

Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon

31 March 2020

1 reference

Translational repression is sufficient for gene silencing by bacterial small noncoding RNAs in the absence of mRNA destruction

31 March 2020

1 reference

Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB.

31 March 2020

1 reference

The small RNA IstR inhibits synthesis of an SOS-induced toxic peptide

31 March 2020

1 reference

mRNA decay in prokaryotes and eukaryotes: different approaches to a similar problem

31 March 2020

1 reference

The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E.

31 March 2020

1 reference

RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs

31 March 2020

1 reference

The 5' end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator

31 March 2020

1 reference

An antisense RNA inhibits translation by competing with standby ribosomes

31 March 2020

1 reference

Control of Fur synthesis by the non-coding RNA RyhB and iron-responsive decoding

31 March 2020

1 reference

A small RNA regulates multiple ABC transporter mRNAs by targeting C/A-rich elements inside and upstream of ribosome-binding sites

31 March 2020

1 reference

mRNA helicase activity of the ribosome

31 March 2020

1 reference

SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay

31 March 2020

1 reference

Target prediction for small, noncoding RNAs in bacteria

31 March 2020

1 reference

Effect of RyhB small RNA on global iron use in Escherichia coli

31 March 2020

1 reference

A conserved small RNA promotes silencing of the outer membrane protein YbfM

31 March 2020

1 reference

Global analysis of small RNA and mRNA targets of Hfq

31 March 2020

1 reference

The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium

31 March 2020

1 reference

Translational control and target recognition by Escherichia coli small RNAs in vivo

31 March 2020

1 reference

Extension inhibition analysis of translation initiation complexes

31 March 2020

1 reference

Two seemingly homologous noncoding RNAs act hierarchically to activate glmS mRNA translation

31 March 2020

1 reference

The RNA degradosome and poly(A) polymerase of Escherichia coli are required in vivo for the degradation of small mRNA decay intermediates containing REP-stabilizers.

31 March 2020

1 reference

Characterization of the role of ribonucleases in Salmonella small RNA decay

31 March 2020

1 reference

A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome

31 March 2020

1 reference

The ams-1 and rne-3071 temperature-sensitive mutations in the ams gene are in close proximity to each other and cause substitutions within a domain that resembles a product of the Escherichia coli mre locus

31 March 2020

1 reference

The Ams (altered mRNA stability) protein and ribonuclease E are encoded by the same structural gene of Escherichia coli

31 March 2020

1 reference

Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis

31 March 2020

1 reference

Revisiting the principles of microRNA target recognition and mode of action

31 March 2020

1 reference

In vitro analysis of the interaction between the small RNA SR1 and its primary target ahrC mRNA

31 March 2020

1 reference

Ribonuclease E is a 5'-end-dependent endonuclease

31 March 2020

1 reference

A 5'-terminal stem-loop structure can stabilize mRNA in Escherichia coli

31 March 2020

1 reference

Control of RNase E-mediated RNA degradation by 5'-terminal base pairing in E. coli

31 March 2020

1 reference

Ectopic RNase E sites promote bypass of 5'-end-dependent mRNA decay in Escherichia coli.

31 March 2020

1 reference

In the absence of translation, RNase E can bypass 5' mRNA stabilizers in Escherichia coli

31 March 2020

1 reference

Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover.

31 March 2020

1 reference

Killer and protective ribosomes

31 March 2020

1 reference

Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq

31 March 2020

1 reference

Reconstitution and analysis of the multienzyme Escherichia coli RNA degradosome.

31 March 2020

1 reference

Novel small RNA-encoding genes in the intergenic regions of Escherichia coli

31 March 2020

1 reference

Footprinting mRNA-ribosome complexes with chemical probes

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19620966

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19620966

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The stability of Escherichia coli lacZ mRNA depends upon the simultaneity of its synthesis and translation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19620966

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.1631

2 references

Consolidated OpenCitations Corpus – April 2017

2720517

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2 February 2020

2720517

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Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

2 references

2720517

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