Amino acid substitutions in yeast TFIIF confer upstream shifts in transcription initiation and altered interaction with RNA polymerase II. (Q27939300)

Transcription factor IIF subunit TFG1 YGR186W

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

author name string

Mohamed A Ghazy

1

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Seth A Brodie

2

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Michelle L Ammerman

3

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Lynn M Ziegler

4

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Alfred S Ponticelli

Molecular and Cellular Biology

5

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language of work or name

English

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publication date

December 2004

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published in

1 reference

1 December 2016

24

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issue

24

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page(s)

10975-85

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cites work

Novel dimerization fold of RAP30/RAP74 in human TFIIF at 1.7 A resolution

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A motif shared by TFIIF and TFIIB mediates their interaction with the RNA polymerase II carboxy-terminal domain phosphatase Fcp1p in Saccharomyces cerevisiae

20 March 2017

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Structural homology between the Rap30 DNA-binding domain and linker histone H5: implications for preinitiation complex assembly

20 March 2017

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Trajectory of DNA in the RNA polymerase II transcription preinitiation complex

20 March 2017

1 reference

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TFIIF-TAF-RNA polymerase II connection

20 March 2017

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Transcription factor IIE binds preferentially to RNA polymerase IIa and recruits TFIIH: a model for promoter clearance

20 March 2017

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Identification of the gene (SSU71/TFG1) encoding the largest subunit of transcription factor TFIIF as a suppressor of a TFIIB mutation in Saccharomyces cerevisiae

20 March 2017

1 reference

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Roles for both the RAP30 and RAP74 subunits of transcription factor IIF in transcription initiation and elongation by RNA polymerase II

20 March 2017

1 reference

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5-Fluoroorotic acid as a selective agent in yeast molecular genetics

20 March 2017

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The general transcription factors of RNA polymerase II

20 March 2017

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The carboxyl terminus of RAP30 is similar in sequence to region 4 of bacterial sigma factors and is required for function

20 March 2017

1 reference

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Five intermediate complexes in transcription initiation by RNA polymerase II

20 March 2017

1 reference

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Yeast RNA Polymerase II Lacking the Rpb9 Subunit Is Impaired for Interaction with Transcription Factor IIF

7 April 2017

1 reference

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Promoter-specific shifts in transcription initiation conferred by yeast TFIIB mutations are determined by the sequence in the immediate vicinity of the start sites

29 September 2017

1 reference

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The RAP74 subunit of human transcription factor IIF has similar roles in initiation and elongation

29 September 2017

1 reference

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A region within the RAP74 subunit of human transcription factor IIF is critical for initiation but dispensable for complex assembly

29 September 2017

1 reference

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Functions of the N- and C-terminal domains of human RAP74 in transcriptional initiation, elongation, and recycling of RNA polymerase II

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

RAP74 induces promoter contacts by RNA polymerase II upstream and downstream of a DNA bend centered on the TATA box.

29 September 2017

1 reference

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The RNA polymerase II general elongation factors

29 September 2017

1 reference

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RNA polymerase II-associated protein (RAP) 74 binds transcription factor (TF) IIB and blocks TFIIB-RAP30 binding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Cryptic DNA-binding domain in the C terminus of RNA polymerase II general transcription factor RAP30.

29 September 2017

1 reference

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Regulatory proteins in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Structure and associated DNA-helicase activity of a general transcription initiation factor that binds to RNA polymerase II.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Mechanism of promoter selection by RNA polymerase II: mammalian transcription factors alpha and beta gamma promote entry of polymerase into the preinitiation complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Role of the mammalian transcription factors IIF, IIS, and IIX during elongation by RNA polymerase II.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

The small subunit of transcription factor IIF recruits RNA polymerase II into the preinitiation complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

RNA polymerase II-associated proteins are required for a DNA conformation change in the transcription initiation complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Wrapping of promoter DNA around the RNA polymerase II initiation complex induced by TFIIF.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

The N-terminal region of yeast TFIIB contains two adjacent functional domains involved in stable RNA polymerase II binding and transcription start site selection.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Three-dimensional structure of yeast RNA polymerase II at 16 A resolution

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Promoter specificity of basal transcription factors

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

A key role for the alpha 1 helix of human RAP74 in the initiation and elongation of RNA chains.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Dual roles for transcription factor IIF in promoter escape by RNA polymerase II.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Functional analysis of Drosophila factor 5 (TFIIF), a general transcription factor.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=533996

Promoters, activator proteins, and the mechanism of transcriptional initiation in yeast

27 November 2018

1 reference

12 December 2020

Transcription initiated by RNA polymerase II and purified transcription factors from liver. Transcription factors alpha, beta gamma, and delta promote formation of intermediates in assembly of the functional preinitiation complex

1 reference

12 December 2020

1 reference

12 December 2020

Factor-stimulated RNA polymerase II transcribes at physiological elongation rates on naked DNA but very poorly on chromatin templates

1 reference

12 December 2020

RNA polymerase II subunit RPB9 is required for accurate start site selection

1 reference

12 December 2020

The activity of COOH-terminal domain phosphatase is regulated by a docking site on RNA polymerase II and by the general transcription factors IIF and IIB

1 reference

12 December 2020

Functional domains of human RAP74 including a masked polymerase binding domain

1 reference

12 December 2020

The RNA polymerase II elongation complex

1 reference

12 December 2020