Dbp6p is an essential putative ATP-dependent RNA helicase required for 60S-ribosomal-subunit assembly in Saccharomyces cerevisiae (Q27937592)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

title

Dbp6p is an essential putative ATP-dependent RNA helicase required for 60S-ribosomal-subunit assembly in Saccharomyces cerevisiae (English)

2 references

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

Putative ATP-dependent RNA helicase DBP6 YNR038W

10 November 2019

main subject

Saccharomyces cerevisiae

0 references

1 reference

GOA release 2020-03-11

author

Dieter Kressler

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

Manuel Rojo

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

author name string

J de la Cruz

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

P Linder

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

language of work or name

English

0 references

publication date

1 April 1998

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

Molecular and Cellular Biology

10 November 2019

published in

2 references

1 December 2016

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10 November 2019

volume

18

1 reference

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10 November 2019

issue

4

1 reference

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10 November 2019

page(s)

1855-1865

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

Dbp7p, a putative ATP-dependent RNA helicase from Saccharomyces cerevisiae, is required for 60S ribosomal subunit assembly

10 November 2019

cites work

1 reference

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Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3' end formation of 5.8S rRNA in Saccharomyces cerevisiae

20 March 2017

1 reference

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The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases

20 March 2017

1 reference

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Fal1p is an essential DEAD-box protein involved in 40S-ribosomal-subunit biogenesis in Saccharomyces cerevisiae

20 March 2017

1 reference

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Saccharomyces cerevisiae Nip7p is required for efficient 60S ribosome subunit biogenesis.

20 March 2017

1 reference

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The rRNA-processing function of the yeast U14 small nucleolar RNA can be rescued by a conserved RNA helicase-like protein

20 March 2017

1 reference

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Rok1p is a putative RNA helicase required for rRNA processing

20 March 2017

1 reference

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The p20 and Ded1 proteins have antagonistic roles in eIF4E-dependent translation in Saccharomyces cerevisiae.

20 March 2017

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Ribosomal protein L32 of Saccharomyces cerevisiae influences both the splicing of its own transcript and the processing of rRNA.

20 March 2017

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Requirement of the DEAD-Box protein ded1p for messenger RNA translation

20 March 2017

1 reference

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The yeast phosphatidylinositol kinase homolog TOR2 activates RHO1 and RHO2 via the exchange factor ROM2.

20 March 2017

1 reference

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Dbp3p, a putative RNA helicase in Saccharomyces cerevisiae, is required for efficient pre-rRNA processing predominantly at site A3.

20 March 2017

1 reference

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Nop2p is required for pre-rRNA processing and 60S ribosome subunit synthesis in yeast

20 March 2017

1 reference

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RRP5 is required for formation of both 18S and 5.8S rRNA in yeast

20 March 2017

1 reference

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The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism

20 March 2017

1 reference

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Yeast ribosomal protein L1 is required for the stability of newly synthesized 5S rRNA and the assembly of 60S ribosomal subunits.

20 March 2017

1 reference

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The yeast NOP4 gene product is an essential nucleolar protein required for pre-rRNA processing and accumulation of 60S ribosomal subunits.

20 March 2017

1 reference

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The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site

20 March 2017

1 reference

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20 March 2017

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Site-directed mutagenesis by overlap extension using the polymerase chain reaction

20 March 2017

1 reference

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A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

20 March 2017

1 reference

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An essential yeast protein, encoded by duplicated genes TIF1 and TIF2 and homologous to the mammalian translation initiation factor eIF-4A, can suppress a mitochondrial missense mutation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Translation initiation and ribosomal biogenesis: involvement of a putative rRNA helicase and RPL46.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Depletion of yeast ribosomal proteins L16 or rp59 disrupts ribosome assembly

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

GCD2, a translational repressor of the GCN4 gene, has a general function in the initiation of protein synthesis in Saccharomyces cerevisiae

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

The small nucleolar RNP protein NOP1 (fibrillarin) is required for pre-rRNA processing in yeast

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

PRP16 is an RNA-dependent ATPase that interacts transiently with the spliceosome

20 March 2017

1 reference

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The purified yeast pre-mRNA splicing factor PRP2 is an RNA-dependent NTPase.

20 March 2017

1 reference

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A putative ATP-dependent RNA helicase involved in Saccharomyces cerevisiae ribosome assembly

20 March 2017

1 reference

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New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites

20 March 2017

1 reference

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One-step gene disruption in yeast

20 March 2017

1 reference

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New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae

20 March 2017

1 reference

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Improved method for high efficiency transformation of intact yeast cells

20 March 2017

1 reference

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Elevated recombination rates in transcriptionally active DNA

20 March 2017

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Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C

20 March 2017

1 reference

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PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

A new generation of information retrieval tools for biologists: the example of the ExPASy WWW server

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Function and synthesis of small nucleolar RNAs

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Processing of pre-ribosomal RNA in Saccharomyces cerevisiae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

7 April 2017

Birth of the D-E-A-D box

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Bidirectional RNA helicase activity of eucaryotic translation initiation factors 4A and 4F

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

D-E-A-D protein family of putative RNA helicases

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Synthetic lethality with fibrillarin identifies NOP77p, a nucleolar protein required for pre-rRNA processing and modification

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

RNA turnover and the control of mitochondrial gene expression

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

RNA turnover: the helicase story unwinds

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

18S rRNA processing requires the RNA helicase-like protein Rrp3.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Processing of eukaryotic pre-rRNA: the role of the transcribed spacers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

DbpA: a DEAD box protein specifically activated by 23s rRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Processing of eukaryotic ribosomal RNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

The nucleolus: an organelle formed by the act of building a ribosome.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

[12] One-step gene disruption in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Structure and function of E. coli ribosomes. 8. Cold-sensitive mutants defective in ribosome assembly

29 September 2017

1 reference

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Cold-sensitive Mutations in Salmonella typhimurium Which Affect Ribosome Synthesis

29 September 2017

1 reference

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Codon usage patterns in Escherichia coli, Bacillus subtilis, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Drosophila melanogaster and Homo sapiens; a review of the considerable within-species diversity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Translation in Saccharomyces cerevisiae: initiation factor 4A-dependent cell-free system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

deaD, a new Escherichia coli gene encoding a presumed ATP-dependent RNA helicase, can suppress a mutation in rpsB, the gene encoding ribosomal protein S2.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Assembly of 60S ribosomal subunits is perturbed in temperature-sensitive yeast mutants defective in ribosomal protein L16

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Trans-acting factors in ribosome synthesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Processing of the yeast pre-rRNA at sites A(2) and A(3) is linked.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

NOP3 is an essential yeast protein which is required for pre-rRNA processing

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Localization of vasa protein to the Drosophila pole plasm is independent of its RNA-binding and helicase activities

2 June 2018

1 reference

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RNA helicase activity associated with the human p68 protein

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

An eIF-4A-like protein is a suppressor of an Escherichia coli mutant defective in 50S ribosomal subunit assembly

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121415

Ribosomal precursor particles from yeast

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9528757

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RNA helicases: modulators of RNA structure

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9528757

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.18.4.1855

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528757%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

2 references