Domain structure and protein interactions of the silent information regulator Sir3 revealed by screening a nested deletion library of protein fragments (Q27935281)

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English	Domain structure and protein interactions of the silent information regulator Sir3 revealed by screening a nested deletion library of protein fragments	scientific article

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scholarly article

1 reference

PubMed publication ID

1 December 2016

Domain structure and protein interactions of the silent information regulator Sir3 revealed by screening a nested deletion library of protein fragments (English)

1 reference

PubMed publication ID

1 December 2016

protein structure

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Chromatin-silencing protein SIR4 YDR227W

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GOA release 2020-03-11

Chromatin-silencing protein SIR3 YLR442C

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GOA release 2020-03-11

Tom Ellenberger

6

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author name string

Daniel A King

1

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Brian E Hall

2

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Melanie A Iwamoto

3

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Khine Zar Win

4

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Ju Fang Chang

5

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language of work or name

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publication date

21 July 2006

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Journal of Biological Chemistry

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PubMed publication ID

1 December 2016

281

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29

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20107-19

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Common themes in mechanisms of gene silencing

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https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Ordered nucleation and spreading of silenced chromatin in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Deciphering NAD-dependent deacetylases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Enzymatic activities of Sir2 and chromatin silencing

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Modifiers of position effect are shared between telomeric and silent mating-type loci in S. cerevisiae.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

The molecular biology of the SIR proteins

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

The Sir proteins of Saccharomyces cerevisiae: mediators of transcriptional silencing and much more.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Silent information regulator protein complexes in Saccharomyces cerevisiae: a SIR2/SIR4 complex and evidence for a regulatory domain in SIR4 that inhibits its interaction with SIR3.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Evidence that a complex of SIR proteins interacts with the silencer and telomere-binding protein RAP1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Multiple interactions in Sir protein recruitment by Rap1p at silencers and telomeres in yeast.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Rap1-Sir4 binding independent of other Sir, yKu, or histone interactions initiates the assembly of telomeric heterochromatin in yeast

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Sir2p exists in two nucleosome-binding complexes with distinct deacetylase activities

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Yeast heterochromatin: regulation of its assembly and inheritance by histones

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins: a molecular model for the formation of heterochromatin in yeast

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

A phylogenetically conserved NAD+-dependent protein deacetylase activity in the Sir2 protein family.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Cloning and characterization of four SIR genes of Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Functional domains of SIR4, a gene required for position effect regulation in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Mutation in the silencing gene S/R4 can delay aging in S. cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

The Sir4 C-terminal coiled coil is required for telomeric and mating type silencing in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Hold tight (but not too tight) to get it right: accurate bypass of an 8-oxoguanine lesion by DNA polymerase beta

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Structure of a Sir2 enzyme bound to an acetylated p53 peptide

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Structure of the Yeast Hst2 Protein Deacetylase in Ternary Complex with 2′-O-Acetyl ADP Ribose and Histone Peptide

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Crystal structure of a SIR2 homolog-NAD complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Structure of the histone deacetylase SIRT2

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Assembly of the SIR complex and its regulation by O-acetyl-ADP-ribose, a product of NAD-dependent histone deacetylation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

SIR2 and SIR4 interactions differ in core and extended telomeric heterochromatin in yeast

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Combinatorial protein engineering by incremental truncation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

A simple in vivo assay for increased protein solubility

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Libraries of hybrid proteins from distantly related sequences

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

57 Chloramphenicol acetyltransferase from chloramphenicol-resistant bacteria

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Temperature and pH-dependent supramolecular self-assembly of amelogenin molecules: a dynamic light-scattering analysis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Structure of the coiled-coil dimerization motif of Sir4 and its interaction with Sir3

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

An Escherichia coli plasmid vector system for high-level production and purification of heterologous peptides fused to active chloramphenicol acetyltransferase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Chloramphenicol acetyltransferase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Rapid generation of incremental truncation libraries for protein engineering using alpha-phosphothioate nucleotides.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Constructing high complexity synthetic libraries of long ORFs using in vitro selection

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Selecting Open Reading Frames From DNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Single-vector three-frame expression systems for affinity-tagged proteins

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

A universal, vector-based system for nucleic acid reading-frame selection

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

A second-generation system for unbiased reading frame selection

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

An enzymatic activity in the yeast Sir2 protein that is essential for gene silencing

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Rapid protein-folding assay using green fluorescent protein

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Silent domains are assembled continuously from the telomere and are defined by promoter distance and strength, and by SIR3 dosage

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

Protein solubility and folding monitored in vivo by structural complementation of a genetic marker protein

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M512588200

21 January 2018

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