FACT and the proteasome promote promoter chromatin disassembly and transcriptional initiation. (Q27933660)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

title

FACT and the proteasome promote promoter chromatin disassembly and transcriptional initiation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

Chromatin-remodeling protein SPT16 YGL207W

1 February 2020

main subject

cell biology

0 references

1 reference

GOA release 2020-03-11

author

Jessica Tyler

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

author name string

Stephanie K Williams

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Mekonnen L Dechassa

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Chandrima Das

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Melissa Adkins

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Chengwei Liu

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Blaine Bartholomew

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Monica Ransom

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Jeffrey Linger

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

language of work or name

English

0 references

publication date

1 July 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

1 February 2020

published in

2 references

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

volume

284

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

issue

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

page(s)

23461-23471

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

The role of chromatin during transcription

1 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Opposing roles for Set2 and yFACT in regulating TBP binding at promoters

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Transcriptional activators are dispensable for transcription in the absence of Spt6-mediated chromatin reassembly of promoter regions

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Histone H2B ubiquitylation is associated with elongating RNA polymerase II

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Structural features of nucleosomes reorganized by yeast FACT and its HMG box component, Nhp6.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Multiple Nhp6 molecules are required to recruit Spt16-Pob3 to form yFACT complexes and to reorganize nucleosomes.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Transcription elongation factors repress transcription initiation from cryptic sites.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

The 19S regulatory particle of the proteasome is required for efficient transcription elongation by RNA polymerase II.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Crystal structure of the nucleosome core particle at 2.8 A resolution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Yeast HMG proteins NHP6A/B potentiate promoter-specific transcriptional activation in vivo and assembly of preinitiation complexes in vitro

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Regulation of PHO4 nuclear localization by the PHO80-PHO85 cyclin-CDK complex.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

FACT facilitates transcription-dependent nucleosome alteration

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Identification, purification, and characterization of a PA700-dependent activator of the proteasome

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Rad6-dependent ubiquitination of histone H2B in yeast

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Transcriptional regulation by chromatin disassembly and reassembly.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

A systems approach to measuring the binding energy landscapes of transcription factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

ATP binding and ATP hydrolysis play distinct roles in the function of 26S proteasome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Remodeling protein complexes: insights from the AAA+ unfoldase ClpX and Mu transposase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

The proteasome: a proteolytic nanomachine of cell regulation and waste disposal

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Recruitment of the NuA4 complex poises the PHO5 promoter for chromatin remodeling and activation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Getting into chromatin: how do transcription factors get past the histones?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Evidence that proteolysis of Gal4 cannot explain the transcriptional effects of proteasome ATPase mutations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Histone-histone interactions and centromere function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Nuclear transport and transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Differential binding of c-Myc and Max to nucleosomal DNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

NHP6A and NHP6B, which encode HMG1-like proteins, are candidates for downstream components of the yeast SLT2 mitogen-activated protein kinase pathway

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Accessibility of a glucocorticoid response element in a nucleosome depends on its rotational positioning

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Sug1 modulates yeast transcription activation by Cdc68.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Specific glucocorticoid receptor binding to DNA reconstituted in a nucleosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Mutations in SPT16/CDC68 suppress cis- and trans-acting mutations that affect promoter function in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Stepwise assembly of chromatin during DNA replication in vitro

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

Chromatin disassembly mediated by the histone chaperone Asf1 is essential for transcriptional activation of the yeast PHO5 and PHO8 genes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

A nonproteolytic function of the 19S regulatory subunit of the 26S proteasome is required for efficient activated transcription by human RNA polymerase II.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2749120

H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation

2 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.019562

Proteasomal ATPases link ubiquitylation of histone H2B to methylation of histone H3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.019562

Nucleosomes unfold completely at a transcriptionally active promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.019562

Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.019562

An alphabeta T cell receptor structure at 2.5 A and its orientation in the TCR-MHC complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.019562

Recruitment of a 19S proteasome subcomplex to an activated promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.019562

Physical association of the APIS complex and general transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.019562

SWI/SNF complexes and facilitation of TATA binding protein:nucleosome interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.019562

Defined structural changes occur in a nucleosome upon Amt1 transcription factor binding

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19574230

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A specialized nucleosome modulates transcription factor access to a C. glabrata metal responsive promoter

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19574230

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M109.019562

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19574230%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

2 references

1 December 2016