Post-Golgi Sec proteins are required for autophagy in Saccharomyces cerevisiae (Q27929881)

Rab family GTPase SEC4 YFL005W

GOA release 2020-03-11

1 reference

Molecular Biology of the Cell

GOA release 2020-03-11

4

Daniel J Klionsky

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Kyoko Yasumura-Yorimitsu

series ordinal

3

object named as

Kyoko Yasumura-Yorimitsu

0 references

Usha Nair

series ordinal

2

object named as

Usha Nair

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Jiefei Geng

series ordinal

1

object named as

Jiefei Geng

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language of work or name

English

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publication date

1 July 2010

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published in

1 reference

1 December 2016

21

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issue

13

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page(s)

2257-69

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describes a project that uses

ImageJ

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2893989/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Trs85 directs a Ypt1 GEF, TRAPPIII, to the phagophore to promote autophagy

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The conserved oligomeric Golgi complex is involved in double-membrane vesicle formation during autophagy

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Atg8 controls phagophore expansion during autophagosome formation

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Golgi-resident small GTPase Rab33B interacts with Atg16L and modulates autophagosome formation

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Atg27 is required for autophagy-dependent cycling of Atg9

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Atg9 cycles between mitochondria and the pre-autophagosomal structure in yeasts

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Atg17 regulates the magnitude of the autophagic response

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Atg21 is a phosphoinositide binding protein required for efficient lipidation and localization of Atg8 during uptake of aminopeptidase I by selective autophagy

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Cargo proteins facilitate the formation of transport vesicles in the cytoplasm to vacuole targeting pathway

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Chemical genetic analysis of Apg1 reveals a non-kinase role in the induction of autophagy

20 March 2017

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Ypt32 recruits the Sec4p guanine nucleotide exchange factor, Sec2p, to secretory vesicles; evidence for a Rab cascade in yeast

20 March 2017

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Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion

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The pre-autophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation

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Apg9p/Cvt7p is an integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways

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Formation process of autophagosome is traced with Apg8/Aut7p in yeast

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The exocyst is an effector for Sec4p, targeting secretory vesicles to sites of exocytosis

20 March 2017

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Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

20 March 2017

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The Vps4p AAA ATPase regulates membrane association of a Vps protein complex required for normal endosome function

20 March 2017

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A multispecificity syntaxin homologue, Vam3p, essential for autophagic and biosynthetic protein transport to the vacuole

20 March 2017

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Sec2p mediates nucleotide exchange on Sec4p and is involved in polarized delivery of post-Golgi vesicles

20 March 2017

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Two new Ypt GTPases are required for exit from the yeast trans-Golgi compartment

20 March 2017

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Transport through the yeast endocytic pathway occurs through morphologically distinct compartments and requires an active secretory pathway and Sec18p/N-ethylmaleimide-sensitive fusion protein

20 March 2017

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Two GTPase isoforms, Ypt31p and Ypt32p, are essential for Golgi function in yeast

20 March 2017

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Cytoplasm-to-vacuole targeting and autophagy employ the same machinery to deliver proteins to the yeast vacuole

20 March 2017

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Early stages in the yeast secretory pathway are required for transport of carboxypeptidase Y to the vacuole

20 March 2017

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Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases

20 March 2017

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Membrane protein sorting: biosynthesis, transport and processing of yeast vacuolar alkaline phosphatase

20 March 2017

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Aminopeptidase I of Saccharomyces cerevisiae is localized to the vacuole independent of the secretory pathway

20 March 2017

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Multifunctional yeast high-copy-number shuttle vectors

20 March 2017

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Autophagosome formation: core machinery and adaptations

20 March 2017

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Autophagy defends cells against invading group A Streptococcus

7 April 2017

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The Atg1-Atg13 complex regulates Atg9 and Atg23 retrieval transport from the pre-autophagosomal structure

7 April 2017

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A second set of loxP marker cassettes for Cre-mediated multiple gene knockouts in budding yeast

7 April 2017

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Two distinct pathways for targeting proteins from the cytoplasm to the vacuole/lysosome

7 April 2017

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Novel system for monitoring autophagy in the yeast Saccharomyces cerevisiae

7 April 2017

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Isolation and characterization of yeast mutants in the cytoplasm to vacuole protein targeting pathway

7 April 2017

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Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction

7 April 2017

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Quantitative analysis of autophagy-related protein stoichiometry by fluorescence microscopy

7 April 2017

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The Atg1 kinase complex is involved in the regulation of protein recruitment to initiate sequestering vesicle formation for nonspecific autophagy in Saccharomyces cerevisiae

29 September 2017

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Autophagy and human disease

29 September 2017

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Recruitment of Atg9 to the preautophagosomal structure by Atg11 is essential for selective autophagy in budding yeast

29 September 2017

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Pexophagy: the selective autophagy of peroxisomes.

29 September 2017

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The rab exchange factor Sec2p reversibly associates with the exocyst

29 September 2017

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Early stages of the secretory pathway, but not endosomes, are required for Cvt vesicle and autophagosome assembly in Saccharomyces cerevisiae

29 September 2017

1 reference

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Convergence of multiple autophagy and cytoplasm to vacuole targeting components to a perivacuolar membrane compartment prior to de novo vesicle formation

29 September 2017

1 reference

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Vacuolar localization of oligomeric alpha-mannosidase requires the cytoplasm to vacuole targeting and autophagy pathway components in Saccharomyces cerevisiae

29 September 2017

1 reference

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The role of the COOH terminus of Sec2p in the transport of post-Golgi vesicles

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Continued functioning of the secretory pathway is essential for ribosome synthesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Sec2 protein contains a coiled-coil domain essential for vesicular transport and a dispensable carboxy terminal domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Hydrolysis of GTP by Sec4 protein plays an important role in vesicular transport and is stimulated by a GTPase-activating protein in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Indirect estimation of the area density of Atg8 on the phagophore

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Excess peroxisomes are degraded by autophagic machinery in mammals

2 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Purification and characterization of autophagosomes from rat hepatocytes

2 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Structural characteristics of the PHO8 gene encoding repressible alkaline phosphatase in Saccharomyces cerevisiae

2 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Quantitative regulation of vesicle formation in yeast nonspecific autophagy.

2 June 2018

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A cycling protein complex required for selective autophagy.

27 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2893989

Counting cytokinesis proteins globally and locally in fission yeast.

27 November 2018

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Modulation of N-ethylmaleimide-sensitive factor activity upon amino acid deprivation.

27 November 2018

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Plasma membrane localization of the Yck2p yeast casein kinase 1 isoform requires the C-terminal extension and secretory pathway function

27 November 2018

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Copper ion inducible and repressible promoter systems in yeast

27 November 2018

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12 December 2020

Sec2 is a Highly Efficient Exchange Factor for the Rab Protein Sec4

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12 December 2020

Vinblastine-induced autophagic vacuoles in mouse liver and Ehrlich ascites tumor cells as assessed by freeze-fracture electron microscopy

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12 December 2020

An unexpected link between the secretory path and the organization of the nucleus

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12 December 2020

Ultrastructural characterization of the delimiting membranes of isolated autophagosomes and amphisomes by freeze-fracture electron microscopy

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12 December 2020