Decoding in the Absence of a Codon by tmRNA and SmpB in the Ribosome (Q27678061)

4

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Ann C Kelley

3

object named as

Ann C Kelley

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author name string

Reynald Gillet

2

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Ann C Kelley

How mutations in tRNA distant from the anticodon affect the fidelity of decoding

3

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language of work or name

English

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publication date

16 March 2012

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published in

Science

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volume

335

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issue

6074

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page(s)

1366-9

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cites work

1 reference

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20 March 2017

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20 March 2017

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Visualizing the transfer-messenger RNA as the ribosome resumes translation

20 March 2017

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The Structural Basis for mRNA Recognition and Cleavage by the Ribosome-Dependent Endonuclease RelE

20 March 2017

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The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA

20 March 2017

1 reference

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The Structure of the Ribosome with Elongation Factor G Trapped in the Posttranslocational State

20 March 2017

1 reference

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GTPase activation of elongation factor EF-Tu by the ribosome during decoding

20 March 2017

1 reference

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Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA

20 March 2017

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20 March 2017

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Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB

20 March 2017

1 reference

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Visualizing tmRNA entry into a stalled ribosome

20 March 2017

1 reference

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Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus

20 March 2017

1 reference

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Selection of tRNA by the ribosome requires a transition from an open to a closed form

20 March 2017

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Structure of small protein B: the protein component of the tmRNA-SmpB system for ribosome rescue

20 March 2017

1 reference

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Recognition of cognate transfer RNA by the 30S ribosomal subunit

20 March 2017

1 reference

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Structure of the 30S ribosomal subunit

20 March 2017

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A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli

20 March 2017

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Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

20 March 2017

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20 March 2017

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Phasercrystallographic software

20 March 2017

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Structure of the 70S ribosome complexed with mRNA and tRNA

20 March 2017

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Coot: model-building tools for molecular graphics

20 March 2017

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20 March 2017

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

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20 March 2017

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Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

22 April 2017

1 reference

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The role of SmpB and the ribosomal decoding center in licensing tmRNA entry into stalled ribosomes

7 April 2017

1 reference

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Role of the C-terminal tail of SmpB in the early stage of trans-translation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763467

Beyond ribosome rescue: tmRNA and co-translational processes

29 September 2017

1 reference

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The tmRNA system for translational surveillance and ribosome rescue.

29 September 2017

1 reference

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome

29 September 2017

1 reference

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Structural basis for messenger RNA movement on the ribosome

29 September 2017

1 reference

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A previously uncharacterized role for small protein B (SmpB) in transfer messenger RNA-mediated trans-translation

29 September 2017

1 reference

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Function of the SmpB tail in transfer-messenger RNA translation revealed by a nucleus-encoded form

29 September 2017

1 reference

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Ribosome rescue by tmRNA requires truncated mRNAs

29 September 2017

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Fidelity of aminoacyl-tRNA selection on the ribosome: kinetic and structural mechanisms

29 September 2017

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Crystal structure of methionyl-tRNAfMet transformylase complexed with the initiator formyl-methionyl-tRNAfMet.

29 September 2017

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Accommodation of tmRNA-SmpB into stalled ribosomes: a cryo-EM study

29 September 2017

1 reference

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tmRNA.SmpB complex mimics native aminoacyl-tRNAs in the A site of stalled ribosomes

2 June 2018

1 reference

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Ribosome hijacking: a role for small protein B during trans-translation

2 June 2018

1 reference

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Induced fit in initial selection and proofreading of aminoacyl-tRNA on the ribosome

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763467

SmpB, a unique RNA-binding protein essential for the peptide-tagging activity of SsrA (tmRNA).

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763467

Diverse pore loops of the AAA+ ClpX machine mediate unassisted and adaptor-dependent recognition of ssrA-tagged substrates.

2 June 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217039

Simultaneous and functional binding of SmpB and EF-Tu-TP to the alanyl acceptor arm of tmRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217039

Interaction of SmpB with ribosome from directed hydroxyl radical probing

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217039

RelE toxins from bacteria and Archaea cleave mRNAs on translating ribosomes, which are rescued by tmRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217039

Ribosome rescue: tmRNA tagging activity and capacity in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217039

Cell-free translation reconstituted with purified components

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217039

Studying tmRNA-mediated surveillance and nonstop mRNA decay

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217039

Crystallization of RNA-protein complexes. I. Methods for the large-scale preparation of RNA suitable for crystallographic studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217039

SmpB triggers GTP hydrolysis of elongation factor Tu on ribosomes by compensating for the lack of codon-anticodon interaction during trans-translation initiation

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22422985

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1217039

1 reference

release_v5iopj4rdjbolc5fu7gjqn4vpi

4647744

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/v5iopj4rdjbolc5fu7gjqn4vpi

mapped directly with Wikidata item

24 November 2022

based on heuristic

4647744

1 reference

1 reference

1 reference