Nucleotide Binding and Conformational Switching in the Hexameric Ring of a AAA+ Machine (Q27677748)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23622246%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Nucleotide binding and conformational switching in the hexameric ring of a AAA+ machine (English)

1 reference

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29 February 2020

3

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29 February 2020

Robert T Sauer

6

1 reference

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29 February 2020

author name string

Benjamin M Stinson

1

1 reference

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29 February 2020

Andrew R Nager

2

1 reference

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29 February 2020

Karl R Schmitz

4

1 reference

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29 February 2020

Tania A Baker

5

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29 February 2020

language of work or name

English

0 references

publication date

1 April 2013

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29 February 2020

1 reference

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29 February 2020

volume

153

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29 February 2020

issue

3

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29 February 2020

page(s)

628-639

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Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine

29 February 2020

cites work

1 reference

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Mapping the structure and conformational movements of proteins with transition metal ion FRET

20 March 2017

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Structural model of F1-ATPase and the implications for rotary catalysis

20 March 2017

1 reference

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Complete subunit architecture of the proteasome regulatory particle

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

AAA+ proteins: have engine, will work

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Dynamic and static components power unfolding in topologically closed rings of a AAA+ proteolytic machine

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Detecting intramolecular conformational dynamics of single molecules in short distance range with subnanometer sensitivity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Stepwise unfolding of a β barrel protein by the AAA+ ClpXP protease.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

ClpXP, an ATP-powered unfolding and protein-degradation machine

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

ClpX(P) generates mechanical force to unfold and translocate its protein substrates

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Single-molecule protein unfolding and translocation by an ATP-fueled proteolytic machine.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Control of substrate gating and translocation into ClpP by channel residues and ClpX binding.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Distinct static and dynamic interactions control ATPase-peptidase communication in a AAA+ protease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Mechanism of DNA translocation in a replicative hexameric helicase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Pause and rotation of F(1)-ATPase during catalysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Functional domains of the ClpA and ClpX molecular chaperones identified by limited proteolysis and deletion analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

A rotary molecular motor that can work at near 100% efficiency

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

ATP binds to proteasomal ATPases in pairs with distinct functional effects, implying an ordered reaction cycle

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Asymmetric nucleotide transactions of the HslUV protease.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Pore loops of the AAA+ ClpX machine grip substrates to drive translocation and unfolding

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Diverse pore loops of the AAA+ ClpX machine mediate unassisted and adaptor-dependent recognition of ssrA-tagged substrates.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Rebuilt AAA + motors reveal operating principles for ATP-fuelled machines

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Asymmetric interactions of ATP with the AAA+ ClpX6 unfoldase: allosteric control of a protein machine.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

Linkage between ATP consumption and mechanical unfolding during the protein processing reactions of an AAA+ degradation machine.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674332

The N-terminal zinc binding domain of ClpX is a dimerization domain that modulates the chaperone function

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23622246

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Coupled assay of Na+,K+-ATPase activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23622246

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Phasercrystallographic software

1 reference

20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1107/S0021889807021206

Identifiers

DOI

10.1016/J.CELL.2013.03.029

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23622246%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23622246%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23622246%20AND%20SRC:MED&resulttype=core&format=json