How a DNA Polymerase Clamp Loader Opens a Sliding Clamp (Q27676381)

4

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author name string

Brian A Kelch

1

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Debora L Makino

2

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Mike O'Donnell

Analysis of the role of PCNA-DNA contacts during clamp loading

3

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language of work or name

English

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publication date

23 December 2011

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published in

Science

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volume

334

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issue

6063

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page(s)

1675-80

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

The Mechanism of ATP-Dependent Primer-Template Recognition by a Clamp Loader Complex

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structure of a Sliding Clamp on DNA

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Nucleotide-dependent conformational changes in a protease-associated ATPase HsIU

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Atomic structure of the clamp loader small subunit from Pyrococcus furiosus

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

20 March 2017

https://api.crossref.org/works/10.1126/SCIENCE.1211884

Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structure of a DNA:RNA hybrid duplex. Why RNase H does not cleave pure RNA

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Replisome mechanics: insights into a twin DNA polymerase machine

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

A structure-based model for the synthesis and hydrolysis of ATP by F1-ATPase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Mechanism of the sliding beta-clamp of DNA polymerase III holoenzyme

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Confirmation of the arginine-finger hypothesis for the GAP-stimulated GTP-hydrolysis reaction of Ras

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Protein production by auto-induction in high density shaking cultures

20 March 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1211884

Phasercrystallographic software

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1211884

PHENIX: a comprehensive Python-based system for macromolecular structure solution

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1211884

Coot: model-building tools for molecular graphics

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1211884

UCSF Chimera--a visualization system for exploratory research and analysis

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1211884

Evolutionary relationships and structural mechanisms of AAA+ proteins

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Multiple ATP binding is required to stabilize the "activated" (clamp open) clamp loader of the T4 DNA replication complex

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Mechanism of DNA translocation in a replicative hexameric helicase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

The structure of a ring-opened proliferating cell nuclear antigen-replication factor C complex revealed by fluorescence energy transfer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Evidence that DNA damage detection machinery participates in DNA repair

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Replisome-mediated DNA replication.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

ATP binding to the Escherichia coli clamp loader powers opening of the ring-shaped clamp of DNA polymerase III holoenzyme

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

29 September 2017

Molecular matchmakers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structure and function of the bacteriophage T4 DNA polymerase holoenzyme

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Communication between subunits within an archaeal clamp-loader complex

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Sliding clamp of the bacteriophage T4 polymerase has open and closed subunit interfaces in solution

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

The internal workings of a DNA polymerase clamp-loading machine

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Clamp loading, unloading and intrinsic stability of the PCNA, beta and gp45 sliding clamps of human, E. coli and T4 replicases

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structural and enzymatic studies of the T4 DNA replication system. II. ATPase properties of the polymerase accessory protein complex.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Crystal structure of the catalytic alpha subunit of E. coli replicative DNA polymerase III.

19 June 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Ordered ATP hydrolysis in the gamma complex clamp loader AAA+ machine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Dissection of the ATP-driven reaction cycle of the bacteriophage T4 DNA replication processivity clamp loading system

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Mapping the interaction of DNA with the Escherichia coli DNA polymerase clamp loader complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Using prime-and-switch phasing to reduce model bias in molecular replacement

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Out-of-plane motions in open sliding clamps: molecular dynamics simulations of eukaryotic and archaeal proliferating cell nuclear antigen

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

The mechanical properties of PCNA: implications for the loading and function of a DNA sliding clamp

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Terminal base pairs of oligodeoxynucleotides: imino proton exchange and fraying

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Ultrafast dynamics in DNA: "fraying" at the end of the helix

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Distinct roles for ATP binding and hydrolysis at individual subunits of an archaeal clamp loader

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1211884

Analysis of the ATPase subassembly which initiates processive DNA synthesis by DNA polymerase III holoenzyme

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281585

Structural and enzymatic studies of the T4 DNA replication system. I. Physical characterization of the polymerase accessory protein complex

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22194570

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The structure of T. aquaticus DNA polymerase III is distinct from eukaryotic replicative DNA polymerases

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22194570

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1211884

1 reference

1840445

1840445

1 reference

1 reference

1 reference