Structure and dynamics of hemimethylated GATC sites: implications for DNA-SeqA recognition (Q27641920)

3

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author name string

Sung-Hun Bae

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Hae-Kap Cheong

2

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Sukhyun Kang

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Deog Su Hwang

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Byong-Seok Choi

Journal of Biological Chemistry

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language of work or name

English

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publication date

14 November 2003

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published in

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volume

278

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issue

46

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page(s)

45987-93

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cites work

Beyond Watson and Crick: DNA methylation and molecular enzymology of DNA methyltransferases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Complementary specificity of restriction endonucleases of Diplococcus pneumoniae with respect to DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Arrangement of Dam methylation sites (GATC) in the Escherichia coli chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

The replicative origin of the E. coli chromosome binds to cell membranes only when hemimethylated

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Hemimethylation prevents DNA replication in E. coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Asymmetry of Dam remethylation on the leading and lagging arms of plasmid replicative intermediates

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Mechanisms and biological effects of mismatch repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Correlation of gene transcription with the time of initiation of chromosome replication in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

IS10 transposition is regulated by DNA adenine methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Conformation of N 6 -Methyladenine, a Base Involved in DNA Modification: Restriction Processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Two-dimensional nuclear Overhauser effect: complete relaxation matrix analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Structural features of an influenza virus promoter and their implications for viral RNA synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

MOLMOL: a program for display and analysis of macromolecular structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

A-form conformational motifs in ligand-bound DNA structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Effects of methylation on the stability of nucleic acid conformations: studies at the monomer level.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Rotational dynamics of adenine amino groups in a DNA double helix

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Crystal and molecular structure of d(CGTAGATCTACG) at 2.25 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Alpha/gamma transitions in the B-DNA backbone

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Sequence effects on local DNA topology

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Base-catalysis of imino proton exchange in DNA: effects of catalyst upon DNA structure and dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Effect of hemimethylation and methylation of adenine on the structure and stability of model DNA duplexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Binding of SeqA protein to DNA requires interaction between two or more complexes bound to separate hemimethylated GATC sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

The crystal structure of the trigonal decamer C-G-A-T-C-G-6meA-T-C-G: a B-DNA helix with 10.6 base-pairs per turn

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

DNA methylation influences trpR promoter activity in Escherichia coli K-12

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Influence of N6-methylation of residue A(5) on the conformational behaviour of d(C-C-G-A-A-T-T-C-G-G) in solution studied by 1H-NMR spectroscopy. 1. The duplex form

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

A two-dimensional 1H-NMR study of the dam methylase site: comparison between the hemimethylated GATC sequence, its unmethylated analogue and a hemimethylated CATG sequence. The sequence dependence of methylation upon base-pair lifetimes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Effect of adenine methylation on the structure and dynamics of TpA steps in DNA: NMR structure determination of [d(CGAGGTTTAAACCTCG)]2 and its A9-methylated derivative at 750 MHz

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Studies of base pair kinetics by NMR measurement of proton exchange

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Mononucleotides in aqueous solution: proton magnetic resonance studies of amino groups

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

Interaction of SeqA and Dam methylase on the hemimethylated origin of Escherichia coli chromosomal DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200

A detailed interpretation of OH radical footprints in a TBP-DNA complex reveals the role of dynamics in the mechanism of sequence-specific binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306038200