Crystal structure of NaeI--an evolutionary bridge between DNA endonuclease and topoisomerase (Q27624935)

2

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Y Chen

3

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F Luo

4

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Y Zhao

5

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M D Topal

6

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H Ke

Crystal structure of MunI restriction endonuclease in complex with cognate DNA at 1.7 A resolution

7

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language of work or name

English

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publication date

15 June 2000

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published in

The EMBO Journal

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volume

19

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issue

12

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page(s)

3110-8

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cites work

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Structural and energetic origins of indirect readout in site-specific DNA cleavage by a restriction endonuclease

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Metal ion-mediated substrate-assisted catalysis in type II restriction endonucleases

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The role of metals in catalysis by the restriction endonuclease BamHI

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Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

20 March 2017

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Toroidal structure of lambda-exonuclease

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Crystal structure of Citrobacter freundii restriction endonuclease Cfr10I at 2.15 A resolution

20 March 2017

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Structure and mechanism of DNA topoisomerase II

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The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments

20 March 2017

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Three-dimensional structure of the 67K N-terminal fragment of E. coli DNA topoisomerase I

20 March 2017

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Structure of PvuII endonuclease with cognate DNA

20 March 2017

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Mg2+ binding to the active site of EcoRV endonuclease: a crystallographic study of complexes with substrate and product DNA at 2 A resolution

20 March 2017

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Structure of Bam HI endonuclease bound to DNA: partial folding and unfolding on DNA binding

20 March 2017

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Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing

20 March 2017

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Automated MAD and MIR structure solution

20 March 2017

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

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Preparation of selenomethionyl proteins for phase determination

20 March 2017

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Protein structure comparison by alignment of distance matrices

20 March 2017

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Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees

20 March 2017

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Transcription factors: structural families and principles of DNA recognition

20 March 2017

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Type II restriction endonucleases: structural, functional and evolutionary relationships

29 September 2017

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Crystal structure of restriction endonuclease BglI bound to its interrupted DNA recognition sequence

29 September 2017

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Structural, functional, and evolutionary relationships between lambda-exonuclease and the type II restriction endonucleases

29 September 2017

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29 September 2017

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Step-wise DNA relaxation and decatenation by NaeI-43K.

29 September 2017

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The domain organization of NaeI endonuclease: separation of binding and catalysis

29 September 2017

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Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleases

29 September 2017

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Recognition and cleavage of DNA by type-II restriction endonucleases

29 September 2017

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Changing endonuclease EcoRII Tyr308 to Phe abolishes cleavage but not recognition: possible homology with the Int-family of recombinases

29 September 2017

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Use of specific oligonucleotide duplexes to stimulate cleavage of refractory DNA sites by restriction endonucleases

29 September 2017

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Location of putative binding and catalytic sites of NaeI by random mutagenesis

29 September 2017

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Structure and function of DNA-binding proteins

29 September 2017

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Structure of the DNA-Eco RI endonuclease recognition complex at 3 A resolution

29 September 2017

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EcoRII can be activated to cleave refractory DNA recognition sites

29 September 2017

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DNA and spermidine provide a switch mechanism to regulate the activity of restriction enzyme Nae I.

29 September 2017

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Organization of restriction-modification systems

29 September 2017

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A structural taxonomy of DNA-binding domains

29 September 2017

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Ability of DNA and spermidine to affect the activity of restriction endonucleases from several bacterial species

29 September 2017

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Nonidentical DNA-binding sites of endonuclease NaeI recognize different families of sequences flanking the recognition site

2 June 2018

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Enzymes that push DNA around

2 June 2018

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12 December 2020

Processing of X-ray diffraction data collected in oscillation mode

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12 December 2020

Mutants of the gamma delta resolvase: a genetic analysis of the recombination function

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12 December 2020

Cloning and expression of the NaeI restriction endonuclease-encoding gene and sequence analysis of the NaeI restriction-modification system

1 reference

12 December 2020

Five-stranded beta-sheet sandwiched with two alpha-helices: a structural link between restriction endonucleases EcoRI and EcoRV

1 reference

12 December 2020

DNA topoisomerase and recombinase activities in Nae I restriction endonuclease

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12 December 2020

DNA cleavage by NaeI: protein purification, rate-limiting step, and accuracy

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12 December 2020